Strain Fitness in Shewanella amazonensis SB2B around Sama_0745

Experiment: Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.025 mg/ml
914,989	-				-1.1
915,061	+				-0.7
915,061	+				-0.3
915,075	-				-1.0
915,075	-				-0.5
915,082	+				+0.1
915,082	+				-0.3
915,082	+				-0.1
915,083	-				-0.8
915,083	-				-0.7
915,083	-				+1.7
915,176	+				+0.6
915,176	+				-2.0
915,176	+				-1.0
915,176	+				-1.4
915,176	+				+0.3
915,176	+				+0.2
915,176	+				-1.1
915,176	+				-0.6
915,176	+				-1.7
915,177	-				-2.4
915,177	-				-0.7
915,177	-				-0.6
915,177	-				-1.1
915,181	-				-2.4
915,211	-				+2.0
915,216	+				-0.5
915,216	+				-0.2
915,216	+				-2.2
915,217	-				-1.0
915,217	-				+1.2
915,217	-				-2.6
915,217	-				-1.9
915,217	-				+0.2
915,217	-				-0.3
915,274	+				-2.2
915,274	+				-0.9
915,275	-				+0.4
915,351	+				+0.2
915,352	-				+0.7
915,363	+				+0.6
915,377	+				+1.3
915,377	+				+0.3
915,377	+				-0.2
915,377	+				-2.4
915,378	-				+0.6
915,378	-				-0.6
915,378	-				-1.1
915,378	-				-1.1
915,378	-				-2.4
915,378	-				-1.4
915,378	-				+0.7
915,378	-				+2.0
915,443	+				+0.0
915,443	+				-0.0
915,443	+				-0.0
915,490	+				-0.4
915,491	-				-0.2
915,499	+				-1.4
915,499	+				+1.6
915,500	-				-1.0
915,521	-				+0.4
915,521	-				-1.2
915,523	+				+0.6
915,523	+				-1.0
915,524	-				+1.3
915,524	-				-0.4
915,582	-				-1.2
915,595	+				-0.6
915,664	+				-0.9
915,678	-				-0.1
915,678	-				-1.3
915,678	-				+1.6
915,679	+				-1.4
915,679	+				-2.0
915,679	+				-0.2
915,679	+				+0.4
915,679	+				-0.6
915,679	+				-0.2
915,679	+				-0.7
915,679	+				-0.7
915,680	-				-0.4
915,680	-				-0.4
915,680	-				-1.6
915,692	+				-0.7
915,776	+				-0.7
915,819	+				-0.2
915,820	-				-0.4
915,825	-				-0.0
915,827	-				-2.2
915,827	-				-0.4
915,855	-				+1.6
915,858	+				-0.4
915,908	+				-0.2
915,908	+				-0.7
915,908	+				-0.0
915,908	+				-1.7
915,908	+				-0.4
915,908	+				-0.8
915,908	+				+0.1
915,908	+				+0.8
915,908	+				-0.2
915,908	+				+0.5
915,909	-				-0.4
915,909	-				-1.2
915,909	-				+0.8
915,909	-				-0.9
915,909	-				+1.6
915,909	-				-2.4
915,909	-				+1.6
915,909	-				-0.2
915,909	-				-0.6
915,909	-				-2.4
915,912	+				-1.9
915,913	-				+1.4
915,934	+				-2.7
915,934	+				+0.4
915,934	+				-0.0
915,934	+				+0.3
915,934	+				-1.6
915,934	+				-2.2
915,935	-				+0.7
915,935	-				-2.4
915,935	-				+0.5
915,954	+				-2.1
915,954	+				+0.5
915,954	+				-0.4
915,954	+				-0.5
915,955	-				-0.7
915,955	-				-2.2
915,995	+				-0.4
915,995	+				-2.2
915,995	+				-1.9
915,995	+				+0.3
915,995	+				-0.2
915,996	-				+0.7
915,996	-				-0.0
915,996	-				-0.0
916,268	-		Sama_0745	0.16	-0.0
916,322	+		Sama_0745	0.19	+0.4
916,322	+		Sama_0745	0.19	+2.8
916,344	+		Sama_0745	0.20	-1.4
916,416	+		Sama_0745	0.23	-0.0
916,417	-		Sama_0745	0.23	-3.0
916,448	+		Sama_0745	0.24	-1.7
916,449	-		Sama_0745	0.24	-1.3
916,482	+		Sama_0745	0.26	+3.3
916,482	+		Sama_0745	0.26	-1.0
916,498	+		Sama_0745	0.27	-2.7
916,498	+		Sama_0745	0.27	+1.2
916,499	-		Sama_0745	0.27	+0.6
916,665	+		Sama_0745	0.34	-2.5
916,665	+		Sama_0745	0.34	-1.3
916,665	+		Sama_0745	0.34	-0.6
916,665	+		Sama_0745	0.34	-2.7
916,665	+		Sama_0745	0.34	-0.4
916,666	-		Sama_0745	0.34	-1.4
916,666	-		Sama_0745	0.34	-2.5
916,666	-		Sama_0745	0.34	-3.3
916,704	+		Sama_0745	0.36	+0.1
916,704	+		Sama_0745	0.36	-1.0
916,705	-		Sama_0745	0.36	-0.2
916,708	+		Sama_0745	0.36	-1.7
916,708	+		Sama_0745	0.36	-0.1
916,708	+		Sama_0745	0.36	-0.7
916,708	+		Sama_0745	0.36	-1.4
916,709	-		Sama_0745	0.36	-1.4
916,709	-		Sama_0745	0.36	-0.0
916,709	-		Sama_0745	0.36	-1.1
916,709	-		Sama_0745	0.36	-1.4
916,709	-		Sama_0745	0.36	+0.7
916,709	-		Sama_0745	0.36	-0.4
916,709	-		Sama_0745	0.36	-1.7
916,834	+		Sama_0745	0.42	+0.4
916,834	+		Sama_0745	0.42	-1.4
916,834	+		Sama_0745	0.42	+0.6
916,835	-		Sama_0745	0.42	-0.2
916,835	-		Sama_0745	0.42	-0.5
916,835	-		Sama_0745	0.42	-1.4
916,835	-		Sama_0745	0.42	-2.3
916,835	-		Sama_0745	0.42	-0.6
916,933	-		Sama_0745	0.46	-1.8
916,959	-		Sama_0745	0.47	+0.9
917,121	-		Sama_0745	0.55	-0.1
917,121	-		Sama_0745	0.55	-0.1
917,121	-		Sama_0745	0.55	-2.2
917,136	-		Sama_0745	0.55	-2.3
917,317	+		Sama_0745	0.64	-1.0
917,447	+		Sama_0745	0.69	-3.0
917,448	-		Sama_0745	0.70	+0.3
917,448	-		Sama_0745	0.70	+0.0
917,448	-		Sama_0745	0.70	-1.0
917,669	+		Sama_0745	0.79	-0.7
917,796	-		Sama_0745	0.85	-0.0
917,797	+		Sama_0745	0.85	-1.6
917,797	+		Sama_0745	0.85	+0.3
917,797	+		Sama_0745	0.85	-0.5
917,797	+		Sama_0745	0.85	+1.0
917,797	+		Sama_0745	0.85	-2.0
917,797	+		Sama_0745	0.85	-0.8
917,797	+		Sama_0745	0.85	+0.4
917,798	-		Sama_0745	0.85	-0.8
917,798	-		Sama_0745	0.85	-1.6
917,798	-		Sama_0745	0.85	-1.4
917,798	-		Sama_0745	0.85	-0.0
917,798	-		Sama_0745	0.85	-1.2
917,798	-		Sama_0745	0.85	-0.7
917,798	-		Sama_0745	0.85	+0.8
917,798	-		Sama_0745	0.85	-2.5
917,798	-		Sama_0745	0.85	-0.3
917,840	+		Sama_0745	0.87	-1.1
917,841	-		Sama_0745	0.87	+0.1
917,906	-				-1.0
917,942	+				-0.5
917,942	+				+1.3
917,948	+				+0.1
917,948	+				+0.6
917,948	+				-0.4
917,948	+				-1.2
917,949	-				+0.2
917,949	-				-1.9
917,949	-				-0.4
917,961	-				-0.4
918,023	+				-0.7
918,023	+				-1.2
918,023	+				-3.2
918,024	-				-0.9
918,024	-				-0.1
918,024	-				-1.4
918,129	+				-2.1
918,130	-				-0.4
918,130	-				-1.1
918,156	+				+0.0
918,156	+				+0.5
918,156	+				-0.5
918,175	+				-0.4
918,175	+				-0.7
918,175	+				+0.6
918,175	+				-1.1
918,175	+				-0.5
918,175	+				-0.7
918,176	-				-0.2
918,176	-				-0.0
918,176	-				-0.7
918,176	-				+0.4
918,176	-				-0.9
918,176	-				-2.4
918,177	+				-0.3
918,177	+				-1.0
918,177	+				+0.6
918,177	+				-0.1
918,177	+				-0.9
918,177	+				+1.3
918,177	+				-2.5
918,177	+				-1.1
918,177	+				+0.7
918,177	+				+0.4
918,177	+				+0.6
918,177	+				-0.4
918,177	+				-0.1
918,178	-				-0.0
918,178	-				+0.6
918,178	-				-1.6
918,178	-				+0.2
918,178	-				+1.9
918,178	-				+0.3
918,235	+				-0.1
918,236	-				-3.0
918,236	-				-1.7
918,236	-				-0.9
918,260	+				+1.2
918,261	-				-2.0
918,267	+				-1.4
918,268	-				-0.3
918,273	+				-0.7
918,290	+				-0.7
918,299	-				+0.5
918,407	+				+1.0
918,407	+				-0.0
918,407	+				+0.7
918,407	+				+0.4
918,407	+				+0.2
918,407	+				-0.9
918,407	+				-2.5
918,407	+				+0.5
918,407	+				-0.1
918,407	+				-1.6
918,407	+				-0.5
918,407	+				+1.2
918,407	+				-0.7
918,407	+				-0.1
918,407	+				+0.3
918,407	+				+0.1
918,408	-				-0.1
918,408	-				-1.7
918,408	-				-0.2
918,408	-				-0.7
918,408	-				+1.8
918,408	-				-0.2
918,408	-				-1.0
918,408	-				-1.1
918,408	-				-0.6
918,408	-				-0.9
918,441	+				+0.7
918,442	-				-1.2
918,455	+				+0.8
918,456	-				+0.8
918,456	-				-0.4
918,497	+				-2.7
918,515	-				-1.0
918,523	+				-0.4
918,690	+		Sama_0746	0.14	+1.0
918,719	-		Sama_0746	0.17	-0.2
918,719	-		Sama_0746	0.17	-1.4
918,719	-		Sama_0746	0.17	-1.1
918,719	-		Sama_0746	0.17	+2.2
918,719	-		Sama_0746	0.17	-3.5
918,787	+		Sama_0746	0.25	-1.2
918,788	-		Sama_0746	0.25	-0.2
918,818	+		Sama_0746	0.29	-1.9
918,819	-		Sama_0746	0.29	+0.8
918,843	-		Sama_0746	0.31	+0.2
918,963	+		Sama_0746	0.45	-0.8
918,963	+		Sama_0746	0.45	-2.2
918,993	+		Sama_0746	0.48	+0.2
919,007	-		Sama_0746	0.50	-0.4
919,067	+		Sama_0746	0.56	+0.7
919,067	+		Sama_0746	0.56	-2.1
919,068	-		Sama_0746	0.56	-1.7
919,068	-		Sama_0746	0.56	-2.0
919,068	-		Sama_0746	0.56	-1.2
919,089	+		Sama_0746	0.59	-0.2
919,089	+		Sama_0746	0.59	-1.0
919,089	+		Sama_0746	0.59	-1.2
919,090	-		Sama_0746	0.59	-1.9
919,090	-		Sama_0746	0.59	-0.0