Experiment: Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0657 and Sama_0658 are separated by 41 nucleotides Sama_0658 and Sama_0659 are separated by 422 nucleotides
Sama_0657: Sama_0657 - phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq), at 813,803 to 814,861
_0657
Sama_0658: Sama_0658 - hypothetical protein (RefSeq), at 814,903 to 815,079
_0658
Sama_0659: Sama_0659 - ABC transporter, ATP-binding protein (RefSeq), at 815,502 to 817,286
_0659
Position (kb) 814
815
816 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 813.928 kb on + strand, within Sama_0657 at 813.928 kb on + strand, within Sama_0657 at 813.928 kb on + strand, within Sama_0657 at 813.929 kb on - strand, within Sama_0657 at 814.017 kb on - strand, within Sama_0657 at 814.017 kb on - strand, within Sama_0657 at 814.049 kb on + strand, within Sama_0657 at 814.049 kb on + strand, within Sama_0657 at 814.049 kb on + strand, within Sama_0657 at 814.049 kb on + strand, within Sama_0657 at 814.049 kb on + strand, within Sama_0657 at 814.049 kb on + strand, within Sama_0657 at 814.050 kb on - strand, within Sama_0657 at 814.050 kb on - strand, within Sama_0657 at 814.050 kb on - strand, within Sama_0657 at 814.050 kb on - strand, within Sama_0657 at 814.050 kb on - strand, within Sama_0657 at 814.050 kb on - strand, within Sama_0657 at 814.051 kb on + strand, within Sama_0657 at 814.051 kb on + strand, within Sama_0657 at 814.051 kb on + strand, within Sama_0657 at 814.051 kb on + strand, within Sama_0657 at 814.051 kb on + strand, within Sama_0657 at 814.051 kb on + strand, within Sama_0657 at 814.052 kb on - strand, within Sama_0657 at 814.125 kb on + strand, within Sama_0657 at 814.125 kb on + strand, within Sama_0657 at 814.125 kb on + strand, within Sama_0657 at 814.136 kb on + strand, within Sama_0657 at 814.137 kb on - strand, within Sama_0657 at 814.137 kb on - strand, within Sama_0657 at 814.153 kb on + strand, within Sama_0657 at 814.240 kb on + strand, within Sama_0657 at 814.240 kb on + strand, within Sama_0657 at 814.256 kb on + strand, within Sama_0657 at 814.257 kb on - strand, within Sama_0657 at 814.257 kb on - strand, within Sama_0657 at 814.257 kb on - strand, within Sama_0657 at 814.477 kb on + strand, within Sama_0657 at 814.478 kb on - strand, within Sama_0657 at 814.496 kb on - strand, within Sama_0657 at 814.496 kb on - strand, within Sama_0657 at 814.496 kb on - strand, within Sama_0657 at 814.523 kb on + strand, within Sama_0657 at 814.523 kb on + strand, within Sama_0657 at 814.523 kb on + strand, within Sama_0657 at 814.523 kb on + strand, within Sama_0657 at 814.524 kb on - strand, within Sama_0657 at 814.524 kb on - strand, within Sama_0657 at 814.524 kb on - strand, within Sama_0657 at 814.524 kb on - strand, within Sama_0657 at 814.678 kb on + strand, within Sama_0657 at 814.678 kb on + strand, within Sama_0657 at 814.678 kb on + strand, within Sama_0657 at 814.679 kb on - strand, within Sama_0657 at 814.679 kb on - strand, within Sama_0657 at 814.739 kb on - strand, within Sama_0657 at 814.760 kb on + strand at 814.855 kb on + strand at 814.855 kb on + strand at 814.856 kb on - strand at 814.856 kb on - strand at 814.856 kb on - strand at 814.856 kb on - strand at 814.862 kb on + strand at 814.894 kb on + strand at 814.894 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.898 kb on + strand at 814.899 kb on - strand at 814.899 kb on - strand at 814.899 kb on - strand at 814.899 kb on - strand at 814.899 kb on - strand at 814.900 kb on + strand at 814.901 kb on - strand at 814.905 kb on - strand at 814.905 kb on - strand at 814.928 kb on + strand, within Sama_0658 at 814.928 kb on + strand, within Sama_0658 at 814.928 kb on + strand, within Sama_0658 at 814.928 kb on + strand, within Sama_0658 at 814.929 kb on - strand, within Sama_0658 at 814.962 kb on + strand, within Sama_0658 at 814.962 kb on + strand, within Sama_0658 at 815.080 kb on - strand at 815.090 kb on + strand at 815.096 kb on - strand at 815.163 kb on + strand at 815.164 kb on - strand at 815.179 kb on + strand at 815.180 kb on - strand at 815.180 kb on - strand at 815.199 kb on + strand at 815.199 kb on + strand at 815.200 kb on - strand at 815.200 kb on - strand at 815.202 kb on - strand at 815.249 kb on - strand at 815.306 kb on - strand at 815.319 kb on - strand at 815.321 kb on + strand at 815.374 kb on + strand at 815.374 kb on + strand at 815.375 kb on - strand at 815.418 kb on + strand at 815.418 kb on + strand at 815.419 kb on - strand at 815.466 kb on + strand at 815.466 kb on + strand at 815.466 kb on + strand at 815.466 kb on + strand at 815.466 kb on + strand at 815.467 kb on - strand at 815.467 kb on - strand at 815.467 kb on - strand at 815.467 kb on - strand at 815.467 kb on - strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.495 kb on + strand at 815.496 kb on - strand at 815.496 kb on - strand at 815.496 kb on - strand at 815.496 kb on - strand at 815.496 kb on - strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.497 kb on + strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.498 kb on - strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.501 kb on + strand at 815.502 kb on - strand at 815.502 kb on - strand at 815.502 kb on - strand at 815.502 kb on - strand at 815.502 kb on - strand at 815.502 kb on - strand at 815.502 kb on - strand at 815.517 kb on + strand at 815.554 kb on + strand at 815.554 kb on + strand at 815.555 kb on - strand at 815.555 kb on - strand at 815.566 kb on + strand at 815.567 kb on - strand at 815.567 kb on - strand at 815.575 kb on - strand at 815.578 kb on + strand at 815.578 kb on + strand at 815.579 kb on - strand at 815.597 kb on + strand at 815.597 kb on + strand at 815.597 kb on + strand at 815.597 kb on + strand at 815.597 kb on + strand at 815.598 kb on - strand at 815.644 kb on + strand at 815.644 kb on + strand at 815.644 kb on + strand at 815.644 kb on + strand at 815.644 kb on + strand at 815.645 kb on - strand at 815.645 kb on - strand at 815.645 kb on - strand at 815.717 kb on - strand, within Sama_0659 at 815.739 kb on + strand, within Sama_0659 at 815.740 kb on - strand, within Sama_0659 at 815.911 kb on + strand, within Sama_0659 at 815.911 kb on + strand, within Sama_0659 at 815.911 kb on + strand, within Sama_0659 at 815.912 kb on - strand, within Sama_0659 at 815.912 kb on - strand, within Sama_0659 at 815.912 kb on - strand, within Sama_0659 at 815.912 kb on - strand, within Sama_0659 at 815.912 kb on - strand, within Sama_0659 at 815.912 kb on - strand, within Sama_0659 at 815.952 kb on - strand, within Sama_0659 at 815.952 kb on - strand, within Sama_0659 at 815.965 kb on + strand, within Sama_0659 at 815.965 kb on + strand, within Sama_0659 at 815.966 kb on - strand, within Sama_0659 at 815.966 kb on - strand, within Sama_0659 at 816.018 kb on + strand, within Sama_0659 at 816.018 kb on + strand, within Sama_0659 at 816.018 kb on + strand, within Sama_0659 at 816.038 kb on + strand, within Sama_0659 at 816.063 kb on + strand, within Sama_0659 at 816.063 kb on + strand, within Sama_0659 at 816.063 kb on + strand, within Sama_0659 at 816.063 kb on + strand, within Sama_0659 at 816.064 kb on - strand, within Sama_0659 at 816.064 kb on - strand, within Sama_0659 at 816.064 kb on - strand, within Sama_0659 at 816.064 kb on - strand, within Sama_0659 at 816.064 kb on - strand, within Sama_0659 at 816.064 kb on - strand, within Sama_0659 at 816.065 kb on + strand, within Sama_0659 at 816.066 kb on - strand, within Sama_0659
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.025 mg/ml remove 813,928 + Sama_0657 0.12 +1.2 813,928 + Sama_0657 0.12 -0.3 813,928 + Sama_0657 0.12 +0.6 813,929 - Sama_0657 0.12 -0.4 814,017 - Sama_0657 0.20 -0.7 814,017 - Sama_0657 0.20 +0.7 814,049 + Sama_0657 0.23 +0.3 814,049 + Sama_0657 0.23 -0.4 814,049 + Sama_0657 0.23 -0.1 814,049 + Sama_0657 0.23 -1.5 814,049 + Sama_0657 0.23 +0.5 814,049 + Sama_0657 0.23 +0.1 814,050 - Sama_0657 0.23 -2.2 814,050 - Sama_0657 0.23 -0.8 814,050 - Sama_0657 0.23 +1.0 814,050 - Sama_0657 0.23 +1.5 814,050 - Sama_0657 0.23 +0.0 814,050 - Sama_0657 0.23 +0.9 814,051 + Sama_0657 0.23 -1.4 814,051 + Sama_0657 0.23 +0.4 814,051 + Sama_0657 0.23 +0.8 814,051 + Sama_0657 0.23 +0.1 814,051 + Sama_0657 0.23 +1.4 814,051 + Sama_0657 0.23 +0.2 814,052 - Sama_0657 0.24 -0.1 814,125 + Sama_0657 0.30 -0.1 814,125 + Sama_0657 0.30 +0.1 814,125 + Sama_0657 0.30 +0.6 814,136 + Sama_0657 0.31 -0.9 814,137 - Sama_0657 0.32 +0.6 814,137 - Sama_0657 0.32 -2.3 814,153 + Sama_0657 0.33 -0.3 814,240 + Sama_0657 0.41 +0.7 814,240 + Sama_0657 0.41 +1.5 814,256 + Sama_0657 0.43 +0.3 814,257 - Sama_0657 0.43 +0.0 814,257 - Sama_0657 0.43 +1.3 814,257 - Sama_0657 0.43 -2.3 814,477 + Sama_0657 0.64 -2.2 814,478 - Sama_0657 0.64 -0.2 814,496 - Sama_0657 0.65 -0.1 814,496 - Sama_0657 0.65 -0.1 814,496 - Sama_0657 0.65 -2.2 814,523 + Sama_0657 0.68 +0.2 814,523 + Sama_0657 0.68 -0.5 814,523 + Sama_0657 0.68 -2.8 814,523 + Sama_0657 0.68 +0.2 814,524 - Sama_0657 0.68 +1.1 814,524 - Sama_0657 0.68 -1.6 814,524 - Sama_0657 0.68 +1.0 814,524 - Sama_0657 0.68 -2.1 814,678 + Sama_0657 0.83 +0.0 814,678 + Sama_0657 0.83 -1.1 814,678 + Sama_0657 0.83 -0.0 814,679 - Sama_0657 0.83 +0.6 814,679 - Sama_0657 0.83 +0.4 814,739 - Sama_0657 0.88 +0.3 814,760 + +1.4 814,855 + +0.6 814,855 + +0.4 814,856 - -1.5 814,856 - -2.9 814,856 - -0.8 814,856 - +0.3 814,862 + -1.1 814,894 + -1.1 814,894 + -0.8 814,898 + +0.4 814,898 + +1.6 814,898 + +0.2 814,898 + -0.5 814,898 + -0.4 814,898 + +0.4 814,898 + -0.9 814,898 + +0.8 814,898 + -0.3 814,899 - +0.1 814,899 - -1.0 814,899 - -2.2 814,899 - -1.1 814,899 - -0.7 814,900 + +1.8 814,901 - -0.7 814,905 - -2.3 814,905 - -0.8 814,928 + Sama_0658 0.14 -2.0 814,928 + Sama_0658 0.14 +0.2 814,928 + Sama_0658 0.14 -0.7 814,928 + Sama_0658 0.14 -0.4 814,929 - Sama_0658 0.15 -0.6 814,962 + Sama_0658 0.33 -0.4 814,962 + Sama_0658 0.33 +1.5 815,080 - +0.5 815,090 + -0.3 815,096 - -0.2 815,163 + -1.2 815,164 - -1.4 815,179 + -1.8 815,180 - -2.5 815,180 - -1.8 815,199 + +0.2 815,199 + +0.2 815,200 - -1.7 815,200 - +0.1 815,202 - -2.4 815,249 - -0.4 815,306 - -2.9 815,319 - +1.2 815,321 + -0.7 815,374 + +0.4 815,374 + -1.8 815,375 - -1.6 815,418 + +2.0 815,418 + -1.3 815,419 - +0.1 815,466 + -0.1 815,466 + +1.1 815,466 + -0.3 815,466 + +0.2 815,466 + -0.3 815,467 - -1.9 815,467 - +0.5 815,467 - -1.3 815,467 - +0.2 815,467 - -1.2 815,495 + -1.8 815,495 + +1.7 815,495 + -2.4 815,495 + +0.4 815,495 + +1.0 815,495 + -0.6 815,495 + -1.3 815,495 + -0.4 815,496 - -1.0 815,496 - -1.6 815,496 - +0.6 815,496 - -0.5 815,496 - -2.1 815,497 + -1.1 815,497 + +0.3 815,497 + -0.5 815,497 + -0.1 815,497 + +1.5 815,497 + +1.2 815,497 + +0.9 815,497 + +0.0 815,497 + -0.6 815,497 + -1.3 815,497 + +0.1 815,497 + +1.9 815,498 - -1.5 815,498 - -0.4 815,498 - +0.3 815,498 - +0.8 815,498 - +0.6 815,498 - +0.5 815,498 - -0.4 815,498 - +0.5 815,498 - -0.3 815,498 - +0.2 815,498 - -1.3 815,498 - +3.5 815,498 - -1.0 815,498 - -0.9 815,498 - -3.0 815,501 + -1.3 815,501 + +0.3 815,501 + -0.7 815,501 + +0.4 815,501 + -0.9 815,501 + -2.1 815,501 + +0.3 815,501 + -1.3 815,501 + +0.2 815,501 + +0.3 815,501 + -0.8 815,502 - -0.8 815,502 - -0.2 815,502 - -1.2 815,502 - -0.9 815,502 - -2.5 815,502 - +0.7 815,502 - +2.2 815,517 + +0.0 815,554 + +0.9 815,554 + +2.9 815,555 - -0.3 815,555 - +0.0 815,566 + -1.3 815,567 - +1.2 815,567 - -1.1 815,575 - +0.9 815,578 + -1.7 815,578 + -1.3 815,579 - -1.1 815,597 + +0.6 815,597 + -2.4 815,597 + -0.8 815,597 + -0.3 815,597 + +0.4 815,598 - -0.3 815,644 + +0.5 815,644 + -0.9 815,644 + +1.5 815,644 + +1.5 815,644 + -0.6 815,645 - +0.2 815,645 - -1.1 815,645 - +0.4 815,717 - Sama_0659 0.12 -0.6 815,739 + Sama_0659 0.13 -0.3 815,740 - Sama_0659 0.13 +0.3 815,911 + Sama_0659 0.23 -2.0 815,911 + Sama_0659 0.23 +1.1 815,911 + Sama_0659 0.23 -1.7 815,912 - Sama_0659 0.23 +0.2 815,912 - Sama_0659 0.23 -0.9 815,912 - Sama_0659 0.23 -0.4 815,912 - Sama_0659 0.23 +0.8 815,912 - Sama_0659 0.23 +0.7 815,912 - Sama_0659 0.23 -2.2 815,952 - Sama_0659 0.25 -0.9 815,952 - Sama_0659 0.25 +1.2 815,965 + Sama_0659 0.26 +1.4 815,965 + Sama_0659 0.26 -1.7 815,966 - Sama_0659 0.26 -2.4 815,966 - Sama_0659 0.26 -1.0 816,018 + Sama_0659 0.29 +0.3 816,018 + Sama_0659 0.29 -2.2 816,018 + Sama_0659 0.29 -0.2 816,038 + Sama_0659 0.30 +0.1 816,063 + Sama_0659 0.31 +0.7 816,063 + Sama_0659 0.31 -0.0 816,063 + Sama_0659 0.31 +0.7 816,063 + Sama_0659 0.31 -2.9 816,064 - Sama_0659 0.31 +0.1 816,064 - Sama_0659 0.31 +0.7 816,064 - Sama_0659 0.31 -0.7 816,064 - Sama_0659 0.31 +0.3 816,064 - Sama_0659 0.31 +0.6 816,064 - Sama_0659 0.31 -0.8 816,065 + Sama_0659 0.32 +0.5 816,066 - Sama_0659 0.32 -1.8
Or see this region's nucleotide sequence