Experiment: Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0626 and Sama_0627 are separated by 169 nucleotides Sama_0627 and Sama_0628 are separated by 303 nucleotides Sama_0628 and Sama_0629 are separated by 1 nucleotides
Sama_0626: Sama_0626 - hypothetical protein (RefSeq), at 778,448 to 779,833
_0626
Sama_0627: Sama_0627 - hypothetical protein (RefSeq), at 780,003 to 780,449
_0627
Sama_0628: Sama_0628 - MarR family transcriptional regulator (RefSeq), at 780,753 to 781,187
_0628
Sama_0629: Sama_0629 - glycerol-3-phosphate dehydrogenase (RefSeq), at 781,189 to 782,403
_0629
Position (kb) 780
781
782 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 779.807 kb on + strand at 779.808 kb on - strand at 779.833 kb on + strand at 779.833 kb on + strand at 779.833 kb on + strand at 779.833 kb on + strand at 779.834 kb on - strand at 779.885 kb on + strand at 779.885 kb on + strand at 779.886 kb on - strand at 779.886 kb on - strand at 779.886 kb on - strand at 779.890 kb on + strand at 779.891 kb on - strand at 779.891 kb on - strand at 779.934 kb on - strand at 780.113 kb on + strand, within Sama_0627 at 780.114 kb on - strand, within Sama_0627 at 780.119 kb on + strand, within Sama_0627 at 780.120 kb on - strand, within Sama_0627 at 780.134 kb on + strand, within Sama_0627 at 780.134 kb on + strand, within Sama_0627 at 780.156 kb on + strand, within Sama_0627 at 780.156 kb on + strand, within Sama_0627 at 780.157 kb on - strand, within Sama_0627 at 780.157 kb on - strand, within Sama_0627 at 780.157 kb on - strand, within Sama_0627 at 780.169 kb on - strand, within Sama_0627 at 780.200 kb on + strand, within Sama_0627 at 780.200 kb on + strand, within Sama_0627 at 780.200 kb on + strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.201 kb on - strand, within Sama_0627 at 780.206 kb on - strand, within Sama_0627 at 780.206 kb on - strand, within Sama_0627 at 780.206 kb on - strand, within Sama_0627 at 780.262 kb on + strand, within Sama_0627 at 780.263 kb on - strand, within Sama_0627 at 780.263 kb on - strand, within Sama_0627 at 780.263 kb on - strand, within Sama_0627 at 780.269 kb on + strand, within Sama_0627 at 780.270 kb on - strand, within Sama_0627 at 780.270 kb on - strand, within Sama_0627 at 780.270 kb on - strand, within Sama_0627 at 780.270 kb on - strand, within Sama_0627 at 780.270 kb on - strand, within Sama_0627 at 780.340 kb on + strand, within Sama_0627 at 780.341 kb on - strand, within Sama_0627 at 780.341 kb on - strand, within Sama_0627 at 780.389 kb on + strand, within Sama_0627 at 780.431 kb on + strand at 780.432 kb on - strand at 780.432 kb on - strand at 780.432 kb on - strand at 780.432 kb on - strand at 780.435 kb on + strand at 780.435 kb on + strand at 780.436 kb on - strand at 780.437 kb on + strand at 780.437 kb on + strand at 780.437 kb on + strand at 780.439 kb on + strand at 780.439 kb on + strand at 780.439 kb on + strand at 780.439 kb on + strand at 780.440 kb on - strand at 780.440 kb on - strand at 780.508 kb on - strand at 780.537 kb on - strand at 780.550 kb on + strand at 780.550 kb on + strand at 780.551 kb on - strand at 780.639 kb on + strand at 780.640 kb on - strand at 780.640 kb on - strand at 780.705 kb on + strand at 780.706 kb on - strand at 780.716 kb on + strand at 780.716 kb on + strand at 780.716 kb on + strand at 780.717 kb on - strand at 780.731 kb on - strand at 780.732 kb on + strand at 780.732 kb on + strand at 780.732 kb on + strand at 780.761 kb on + strand at 780.761 kb on + strand at 780.762 kb on - strand at 780.762 kb on - strand at 780.799 kb on - strand, within Sama_0628 at 780.828 kb on + strand, within Sama_0628 at 780.828 kb on + strand, within Sama_0628 at 780.838 kb on + strand, within Sama_0628 at 780.861 kb on + strand, within Sama_0628 at 780.861 kb on + strand, within Sama_0628 at 780.861 kb on + strand, within Sama_0628 at 780.861 kb on + strand, within Sama_0628 at 780.862 kb on - strand, within Sama_0628 at 780.862 kb on - strand, within Sama_0628 at 780.870 kb on + strand, within Sama_0628 at 780.871 kb on - strand, within Sama_0628 at 780.871 kb on - strand, within Sama_0628 at 780.871 kb on - strand, within Sama_0628 at 780.871 kb on - strand, within Sama_0628 at 780.871 kb on - strand, within Sama_0628 at 780.871 kb on - strand, within Sama_0628 at 780.955 kb on + strand, within Sama_0628 at 781.083 kb on - strand, within Sama_0628 at 781.185 kb on + strand at 781.185 kb on + strand at 781.185 kb on + strand at 781.185 kb on + strand at 781.185 kb on + strand at 781.185 kb on + strand at 781.186 kb on - strand at 781.186 kb on - strand at 781.186 kb on - strand at 781.186 kb on - strand at 781.186 kb on - strand at 781.186 kb on - strand at 781.242 kb on - strand at 781.268 kb on - strand at 781.351 kb on + strand, within Sama_0629 at 781.351 kb on + strand, within Sama_0629 at 781.352 kb on - strand, within Sama_0629 at 781.352 kb on - strand, within Sama_0629 at 781.362 kb on + strand, within Sama_0629 at 781.362 kb on + strand, within Sama_0629 at 781.362 kb on + strand, within Sama_0629 at 781.362 kb on + strand, within Sama_0629 at 781.362 kb on + strand, within Sama_0629 at 781.362 kb on + strand, within Sama_0629 at 781.363 kb on - strand, within Sama_0629 at 781.363 kb on - strand, within Sama_0629 at 781.363 kb on - strand, within Sama_0629 at 781.363 kb on - strand, within Sama_0629 at 781.363 kb on - strand, within Sama_0629 at 781.383 kb on + strand, within Sama_0629 at 781.383 kb on + strand, within Sama_0629 at 781.383 kb on + strand, within Sama_0629 at 781.383 kb on + strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.384 kb on - strand, within Sama_0629 at 781.412 kb on + strand, within Sama_0629 at 781.412 kb on + strand, within Sama_0629 at 781.412 kb on + strand, within Sama_0629 at 781.413 kb on - strand, within Sama_0629 at 781.413 kb on - strand, within Sama_0629 at 781.450 kb on + strand, within Sama_0629 at 781.450 kb on + strand, within Sama_0629 at 781.462 kb on + strand, within Sama_0629 at 781.463 kb on - strand, within Sama_0629 at 781.463 kb on - strand, within Sama_0629 at 781.463 kb on - strand, within Sama_0629 at 781.492 kb on - strand, within Sama_0629 at 781.513 kb on + strand, within Sama_0629 at 781.514 kb on - strand, within Sama_0629 at 781.523 kb on + strand, within Sama_0629 at 781.523 kb on + strand, within Sama_0629 at 781.524 kb on - strand, within Sama_0629 at 781.592 kb on + strand, within Sama_0629 at 781.592 kb on + strand, within Sama_0629 at 781.593 kb on - strand, within Sama_0629 at 781.624 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.727 kb on + strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.728 kb on - strand, within Sama_0629 at 781.761 kb on + strand, within Sama_0629 at 781.762 kb on - strand, within Sama_0629 at 781.762 kb on - strand, within Sama_0629 at 781.910 kb on + strand, within Sama_0629 at 781.910 kb on + strand, within Sama_0629 at 781.911 kb on - strand, within Sama_0629 at 781.911 kb on - strand, within Sama_0629 at 781.933 kb on + strand, within Sama_0629 at 781.934 kb on - strand, within Sama_0629 at 781.934 kb on - strand, within Sama_0629 at 781.934 kb on - strand, within Sama_0629 at 781.934 kb on - strand, within Sama_0629 at 781.971 kb on + strand, within Sama_0629 at 781.972 kb on - strand, within Sama_0629 at 781.972 kb on - strand, within Sama_0629 at 781.972 kb on - strand, within Sama_0629 at 781.972 kb on - strand, within Sama_0629 at 782.065 kb on + strand, within Sama_0629 at 782.065 kb on + strand, within Sama_0629 at 782.080 kb on + strand, within Sama_0629 at 782.081 kb on - strand, within Sama_0629 at 782.081 kb on - strand, within Sama_0629 at 782.081 kb on - strand, within Sama_0629 at 782.089 kb on + strand, within Sama_0629 at 782.090 kb on - strand, within Sama_0629 at 782.090 kb on - strand, within Sama_0629 at 782.090 kb on - strand, within Sama_0629 at 782.090 kb on - strand, within Sama_0629 at 782.090 kb on - strand, within Sama_0629 at 782.090 kb on - strand, within Sama_0629 at 782.139 kb on + strand, within Sama_0629 at 782.140 kb on - strand, within Sama_0629 at 782.140 kb on - strand, within Sama_0629 at 782.140 kb on - strand, within Sama_0629
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.025 mg/ml remove 779,807 + -1.5 779,808 - -3.1 779,833 + +1.0 779,833 + -0.7 779,833 + -0.1 779,833 + -0.1 779,834 - -0.9 779,885 + +1.8 779,885 + -1.7 779,886 - +0.7 779,886 - -0.2 779,886 - +0.4 779,890 + -0.5 779,891 - -1.6 779,891 - +0.6 779,934 - -2.6 780,113 + Sama_0627 0.25 -2.3 780,114 - Sama_0627 0.25 -1.6 780,119 + Sama_0627 0.26 -0.8 780,120 - Sama_0627 0.26 -0.1 780,134 + Sama_0627 0.29 +0.4 780,134 + Sama_0627 0.29 -0.7 780,156 + Sama_0627 0.34 -0.7 780,156 + Sama_0627 0.34 +0.0 780,157 - Sama_0627 0.34 +0.9 780,157 - Sama_0627 0.34 +0.2 780,157 - Sama_0627 0.34 -2.8 780,169 - Sama_0627 0.37 +0.9 780,200 + Sama_0627 0.44 +0.1 780,200 + Sama_0627 0.44 -0.3 780,200 + Sama_0627 0.44 -0.8 780,201 - Sama_0627 0.44 -0.5 780,201 - Sama_0627 0.44 +1.0 780,201 - Sama_0627 0.44 +0.4 780,201 - Sama_0627 0.44 -0.1 780,201 - Sama_0627 0.44 -0.3 780,201 - Sama_0627 0.44 +0.3 780,201 - Sama_0627 0.44 +0.3 780,201 - Sama_0627 0.44 -1.1 780,201 - Sama_0627 0.44 -0.1 780,201 - Sama_0627 0.44 +0.6 780,201 - Sama_0627 0.44 -2.8 780,201 - Sama_0627 0.44 +0.1 780,206 - Sama_0627 0.45 +0.2 780,206 - Sama_0627 0.45 +1.0 780,206 - Sama_0627 0.45 -1.1 780,262 + Sama_0627 0.58 -0.7 780,263 - Sama_0627 0.58 -1.1 780,263 - Sama_0627 0.58 -1.8 780,263 - Sama_0627 0.58 -1.8 780,269 + Sama_0627 0.60 -0.0 780,270 - Sama_0627 0.60 -1.1 780,270 - Sama_0627 0.60 +1.3 780,270 - Sama_0627 0.60 +0.5 780,270 - Sama_0627 0.60 -1.7 780,270 - Sama_0627 0.60 -2.8 780,340 + Sama_0627 0.75 -0.9 780,341 - Sama_0627 0.76 +0.3 780,341 - Sama_0627 0.76 +0.5 780,389 + Sama_0627 0.86 +0.2 780,431 + -0.4 780,432 - -1.4 780,432 - -0.6 780,432 - -1.1 780,432 - +1.6 780,435 + +1.2 780,435 + +0.3 780,436 - -1.4 780,437 + +0.4 780,437 + -2.4 780,437 + -0.9 780,439 + +0.9 780,439 + -1.0 780,439 + +0.4 780,439 + -0.6 780,440 - -0.6 780,440 - +0.4 780,508 - -0.6 780,537 - +0.4 780,550 + -1.4 780,550 + -1.6 780,551 - -1.3 780,639 + +0.9 780,640 - -2.2 780,640 - +1.7 780,705 + -2.1 780,706 - -0.5 780,716 + +0.3 780,716 + -0.9 780,716 + +1.0 780,717 - +0.6 780,731 - +0.5 780,732 + -0.6 780,732 + -0.5 780,732 + +0.9 780,761 + +0.2 780,761 + -2.7 780,762 - -0.1 780,762 - -1.5 780,799 - Sama_0628 0.11 -1.9 780,828 + Sama_0628 0.17 -1.3 780,828 + Sama_0628 0.17 -3.7 780,838 + Sama_0628 0.20 -1.4 780,861 + Sama_0628 0.25 -1.5 780,861 + Sama_0628 0.25 -3.3 780,861 + Sama_0628 0.25 -3.0 780,861 + Sama_0628 0.25 -2.8 780,862 - Sama_0628 0.25 -0.3 780,862 - Sama_0628 0.25 -2.4 780,870 + Sama_0628 0.27 -0.9 780,871 - Sama_0628 0.27 +0.2 780,871 - Sama_0628 0.27 -0.1 780,871 - Sama_0628 0.27 +0.5 780,871 - Sama_0628 0.27 +0.5 780,871 - Sama_0628 0.27 -2.5 780,871 - Sama_0628 0.27 -2.0 780,955 + Sama_0628 0.46 -2.5 781,083 - Sama_0628 0.76 -2.0 781,185 + +0.1 781,185 + -0.5 781,185 + -0.1 781,185 + -1.9 781,185 + -1.2 781,185 + -0.9 781,186 - +0.5 781,186 - -2.5 781,186 - -0.4 781,186 - +0.5 781,186 - -0.8 781,186 - -0.2 781,242 - -0.5 781,268 - -0.3 781,351 + Sama_0629 0.13 -1.0 781,351 + Sama_0629 0.13 +0.5 781,352 - Sama_0629 0.13 -0.1 781,352 - Sama_0629 0.13 +1.2 781,362 + Sama_0629 0.14 -0.1 781,362 + Sama_0629 0.14 -0.2 781,362 + Sama_0629 0.14 -1.6 781,362 + Sama_0629 0.14 +1.5 781,362 + Sama_0629 0.14 +0.7 781,362 + Sama_0629 0.14 -1.7 781,363 - Sama_0629 0.14 -0.7 781,363 - Sama_0629 0.14 +0.6 781,363 - Sama_0629 0.14 -1.2 781,363 - Sama_0629 0.14 -0.8 781,363 - Sama_0629 0.14 -0.1 781,383 + Sama_0629 0.16 -0.4 781,383 + Sama_0629 0.16 -1.7 781,383 + Sama_0629 0.16 -0.2 781,383 + Sama_0629 0.16 +0.9 781,384 - Sama_0629 0.16 +0.9 781,384 - Sama_0629 0.16 -0.1 781,384 - Sama_0629 0.16 -0.4 781,384 - Sama_0629 0.16 -1.9 781,384 - Sama_0629 0.16 -1.5 781,384 - Sama_0629 0.16 -0.1 781,384 - Sama_0629 0.16 +1.4 781,412 + Sama_0629 0.18 -0.4 781,412 + Sama_0629 0.18 -1.5 781,412 + Sama_0629 0.18 +1.5 781,413 - Sama_0629 0.18 -0.1 781,413 - Sama_0629 0.18 -1.7 781,450 + Sama_0629 0.21 +0.8 781,450 + Sama_0629 0.21 -0.5 781,462 + Sama_0629 0.22 +0.2 781,463 - Sama_0629 0.23 +0.2 781,463 - Sama_0629 0.23 +0.3 781,463 - Sama_0629 0.23 -1.0 781,492 - Sama_0629 0.25 -1.1 781,513 + Sama_0629 0.27 -0.9 781,514 - Sama_0629 0.27 -0.1 781,523 + Sama_0629 0.27 -0.2 781,523 + Sama_0629 0.27 -0.9 781,524 - Sama_0629 0.28 -0.4 781,592 + Sama_0629 0.33 -2.9 781,592 + Sama_0629 0.33 -2.0 781,593 - Sama_0629 0.33 -0.8 781,624 + Sama_0629 0.36 -0.5 781,727 + Sama_0629 0.44 -0.1 781,727 + Sama_0629 0.44 -2.2 781,727 + Sama_0629 0.44 -0.5 781,727 + Sama_0629 0.44 -0.2 781,727 + Sama_0629 0.44 -0.2 781,727 + Sama_0629 0.44 +0.1 781,727 + Sama_0629 0.44 -0.2 781,727 + Sama_0629 0.44 -0.6 781,727 + Sama_0629 0.44 +1.1 781,727 + Sama_0629 0.44 -0.1 781,727 + Sama_0629 0.44 -0.6 781,727 + Sama_0629 0.44 -0.5 781,727 + Sama_0629 0.44 +0.3 781,727 + Sama_0629 0.44 -0.7 781,728 - Sama_0629 0.44 -1.3 781,728 - Sama_0629 0.44 -1.1 781,728 - Sama_0629 0.44 -1.7 781,728 - Sama_0629 0.44 -0.2 781,728 - Sama_0629 0.44 -2.5 781,728 - Sama_0629 0.44 -1.1 781,728 - Sama_0629 0.44 -1.1 781,728 - Sama_0629 0.44 -1.4 781,728 - Sama_0629 0.44 -0.9 781,728 - Sama_0629 0.44 -2.2 781,728 - Sama_0629 0.44 +2.6 781,761 + Sama_0629 0.47 -3.1 781,762 - Sama_0629 0.47 -1.8 781,762 - Sama_0629 0.47 +0.3 781,910 + Sama_0629 0.59 -0.2 781,910 + Sama_0629 0.59 -0.4 781,911 - Sama_0629 0.59 -0.1 781,911 - Sama_0629 0.59 -0.3 781,933 + Sama_0629 0.61 +0.6 781,934 - Sama_0629 0.61 -0.7 781,934 - Sama_0629 0.61 -0.5 781,934 - Sama_0629 0.61 -0.7 781,934 - Sama_0629 0.61 -1.6 781,971 + Sama_0629 0.64 -0.7 781,972 - Sama_0629 0.64 -1.5 781,972 - Sama_0629 0.64 -1.2 781,972 - Sama_0629 0.64 +0.2 781,972 - Sama_0629 0.64 -0.5 782,065 + Sama_0629 0.72 -3.0 782,065 + Sama_0629 0.72 -0.9 782,080 + Sama_0629 0.73 +1.9 782,081 - Sama_0629 0.73 -1.4 782,081 - Sama_0629 0.73 +0.2 782,081 - Sama_0629 0.73 -0.2 782,089 + Sama_0629 0.74 -0.2 782,090 - Sama_0629 0.74 +0.6 782,090 - Sama_0629 0.74 +1.5 782,090 - Sama_0629 0.74 -1.1 782,090 - Sama_0629 0.74 -0.9 782,090 - Sama_0629 0.74 -0.3 782,090 - Sama_0629 0.74 -0.4 782,139 + Sama_0629 0.78 -1.5 782,140 - Sama_0629 0.78 -1.4 782,140 - Sama_0629 0.78 -1.2 782,140 - Sama_0629 0.78 -1.1
Or see this region's nucleotide sequence