Experiment: m.b. Cholin acetate 76.57 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_430 and HP15_431 are separated by 92 nucleotides HP15_431 and HP15_432 are separated by 488 nucleotides
HP15_430: HP15_430 - peptidase S33, proline iminopeptidase 1, at 430,093 to 431,055
_430
HP15_431: HP15_431 - D-tyrosyl-tRNA(Tyr) deacylase, at 431,148 to 431,606
_431
HP15_432: HP15_432 - outer membrane protein (porin), at 432,095 to 433,102
_432
Position (kb) 431
432 Strain fitness (log2 ratio) -1
0
1
2 at 430.209 kb on + strand, within HP15_430 at 430.291 kb on + strand, within HP15_430 at 430.311 kb on + strand, within HP15_430 at 430.311 kb on + strand, within HP15_430 at 430.319 kb on - strand, within HP15_430 at 430.329 kb on + strand, within HP15_430 at 430.364 kb on - strand, within HP15_430 at 430.377 kb on - strand, within HP15_430 at 430.458 kb on - strand, within HP15_430 at 430.604 kb on + strand, within HP15_430 at 430.670 kb on - strand, within HP15_430 at 430.700 kb on + strand, within HP15_430 at 430.765 kb on + strand, within HP15_430 at 430.824 kb on + strand, within HP15_430 at 430.827 kb on - strand, within HP15_430 at 430.893 kb on - strand, within HP15_430 at 430.903 kb on + strand, within HP15_430 at 430.926 kb on + strand, within HP15_430 at 430.926 kb on + strand, within HP15_430 at 430.930 kb on - strand, within HP15_430 at 430.932 kb on + strand, within HP15_430 at 430.952 kb on - strand, within HP15_430 at 431.108 kb on + strand at 431.108 kb on + strand at 431.124 kb on + strand at 431.234 kb on - strand, within HP15_431 at 431.406 kb on + strand, within HP15_431 at 431.414 kb on - strand, within HP15_431 at 431.489 kb on + strand, within HP15_431 at 431.507 kb on - strand, within HP15_431 at 431.537 kb on + strand, within HP15_431 at 431.543 kb on + strand, within HP15_431 at 431.550 kb on - strand, within HP15_431 at 431.565 kb on + strand at 431.659 kb on + strand at 431.659 kb on + strand at 431.728 kb on - strand at 431.775 kb on - strand at 431.783 kb on - strand at 431.914 kb on - strand at 432.002 kb on - strand at 432.005 kb on + strand at 432.009 kb on + strand at 432.212 kb on + strand, within HP15_432 at 432.220 kb on - strand, within HP15_432 at 432.291 kb on + strand, within HP15_432 at 432.292 kb on - strand, within HP15_432
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 76.57 mM remove 430,209 + HP15_430 0.12 -0.0 430,291 + HP15_430 0.21 -0.2 430,311 + HP15_430 0.23 -0.4 430,311 + HP15_430 0.23 +0.3 430,319 - HP15_430 0.23 -0.2 430,329 + HP15_430 0.25 -0.0 430,364 - HP15_430 0.28 +0.5 430,377 - HP15_430 0.29 -0.0 430,458 - HP15_430 0.38 -1.5 430,604 + HP15_430 0.53 -0.6 430,670 - HP15_430 0.60 -0.4 430,700 + HP15_430 0.63 -1.0 430,765 + HP15_430 0.70 +0.2 430,824 + HP15_430 0.76 -0.3 430,827 - HP15_430 0.76 +0.0 430,893 - HP15_430 0.83 -0.3 430,903 + HP15_430 0.84 +0.1 430,926 + HP15_430 0.87 -0.3 430,926 + HP15_430 0.87 +0.5 430,930 - HP15_430 0.87 +0.0 430,932 + HP15_430 0.87 +0.5 430,952 - HP15_430 0.89 +0.3 431,108 + +1.8 431,108 + +0.1 431,124 + +0.7 431,234 - HP15_431 0.19 -0.2 431,406 + HP15_431 0.56 +0.2 431,414 - HP15_431 0.58 +0.5 431,489 + HP15_431 0.74 +0.4 431,507 - HP15_431 0.78 +0.2 431,537 + HP15_431 0.85 +0.2 431,543 + HP15_431 0.86 +0.4 431,550 - HP15_431 0.88 +1.0 431,565 + +0.2 431,659 + +1.0 431,659 + -0.1 431,728 - +0.6 431,775 - -0.0 431,783 - -1.2 431,914 - +1.0 432,002 - +2.1 432,005 + +0.2 432,009 + -0.0 432,212 + HP15_432 0.12 +0.3 432,220 - HP15_432 0.12 +1.3 432,291 + HP15_432 0.19 +0.4 432,292 - HP15_432 0.20 +0.0
Or see this region's nucleotide sequence