Experiment: m.b. Cholin acetate 76.57 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3902 and HP15_3903 are separated by 9 nucleotides HP15_3903 and HP15_3904 overlap by 1 nucleotides HP15_3904 and HP15_3905 are separated by 188 nucleotides
HP15_3902: HP15_3902 - hypothetical protein, at 4,132,663 to 4,132,806
_3902
HP15_3903: HP15_3903 - methionine import ATP-binding protein MetN 2, at 4,132,816 to 4,133,748
_3903
HP15_3904: HP15_3904 - binding-protein-dependent transport systems inner membrane component, at 4,133,748 to 4,134,413
_3904
HP15_3905: HP15_3905 - lipoprotein, YaeC family, at 4,134,602 to 4,135,384
_3905
Position (kb)
4133
4134
4135 Strain fitness (log2 ratio)
-1
0
1 at 4132.919 kb on + strand, within HP15_3903 at 4132.963 kb on + strand, within HP15_3903 at 4133.010 kb on + strand, within HP15_3903 at 4133.017 kb on - strand, within HP15_3903 at 4133.400 kb on + strand, within HP15_3903 at 4133.409 kb on - strand, within HP15_3903 at 4133.480 kb on + strand, within HP15_3903 at 4133.514 kb on - strand, within HP15_3903 at 4133.544 kb on - strand, within HP15_3903 at 4133.569 kb on - strand, within HP15_3903 at 4133.637 kb on + strand, within HP15_3903 at 4133.687 kb on + strand at 4133.717 kb on - strand at 4133.737 kb on + strand at 4133.745 kb on - strand at 4133.757 kb on + strand at 4133.800 kb on + strand at 4133.805 kb on + strand at 4133.808 kb on - strand at 4133.827 kb on - strand, within HP15_3904 at 4133.855 kb on + strand, within HP15_3904 at 4133.995 kb on + strand, within HP15_3904 at 4134.068 kb on - strand, within HP15_3904 at 4134.131 kb on + strand, within HP15_3904 at 4134.145 kb on + strand, within HP15_3904 at 4134.326 kb on + strand, within HP15_3904 at 4134.841 kb on + strand, within HP15_3905 at 4134.886 kb on - strand at 4134.910 kb on + strand, within HP15_3905 at 4134.986 kb on + strand, within HP15_3905 at 4135.081 kb on - strand, within HP15_3905 at 4135.137 kb on + strand, within HP15_3905 at 4135.158 kb on + strand, within HP15_3905 at 4135.197 kb on + strand, within HP15_3905 at 4135.197 kb on + strand, within HP15_3905 at 4135.204 kb on - strand, within HP15_3905 at 4135.247 kb on + strand, within HP15_3905 at 4135.362 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 76.57 mM remove 4,132,919 + HP15_3903 0.11 +1.0 4,132,963 + HP15_3903 0.16 -0.5 4,133,010 + HP15_3903 0.21 -0.6 4,133,017 - HP15_3903 0.22 -1.2 4,133,400 + HP15_3903 0.63 -0.7 4,133,409 - HP15_3903 0.64 +0.2 4,133,480 + HP15_3903 0.71 +0.7 4,133,514 - HP15_3903 0.75 -0.7 4,133,544 - HP15_3903 0.78 -0.6 4,133,569 - HP15_3903 0.81 -1.0 4,133,637 + HP15_3903 0.88 +0.2 4,133,687 + -0.8 4,133,717 - -1.0 4,133,737 + +0.9 4,133,745 - -0.5 4,133,757 + -1.3 4,133,800 + -0.5 4,133,805 + -0.1 4,133,808 - -0.6 4,133,827 - HP15_3904 0.12 -0.2 4,133,855 + HP15_3904 0.16 -0.8 4,133,995 + HP15_3904 0.37 -1.5 4,134,068 - HP15_3904 0.48 -0.5 4,134,131 + HP15_3904 0.58 +1.3 4,134,145 + HP15_3904 0.60 -0.2 4,134,326 + HP15_3904 0.87 -1.0 4,134,841 + HP15_3905 0.31 +0.0 4,134,886 - +1.2 4,134,910 + HP15_3905 0.39 -1.0 4,134,986 + HP15_3905 0.49 -0.6 4,135,081 - HP15_3905 0.61 -0.1 4,135,137 + HP15_3905 0.68 -1.0 4,135,158 + HP15_3905 0.71 -0.5 4,135,197 + HP15_3905 0.76 -0.5 4,135,197 + HP15_3905 0.76 -0.9 4,135,204 - HP15_3905 0.77 -0.6 4,135,247 + HP15_3905 0.82 -0.8 4,135,362 - +0.1
Or see this region's nucleotide sequence