Strain Fitness in Marinobacter adhaerens HP15 around HP15_3736

Experiment: m.b. Cholin acetate 76.57 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3734 and HP15_3735 are separated by 45 nucleotidesHP15_3735 and HP15_3736 are separated by 48 nucleotidesHP15_3736 and HP15_3737 are separated by 244 nucleotides HP15_3734: HP15_3734 - conserved hypothetical protein, secreted, at 3,955,172 to 3,955,615 _3734 HP15_3735: HP15_3735 - rhodanese domain protein-like protein, at 3,955,661 to 3,956,224 _3735 HP15_3736: HP15_3736 - protein containing alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen/ peroxiredoxin, C-terminal, at 3,956,273 to 3,956,899 _3736 HP15_3737: HP15_3737 - phospholipase D/transphosphatidylase, at 3,957,144 to 3,958,700 _3737 Position (kb) 3956 3957Strain fitness (log2 ratio) -1 0 1at 3955.330 kb on + strand, within HP15_3734at 3955.486 kb on + strand, within HP15_3734at 3955.494 kb on - strand, within HP15_3734at 3955.510 kb on - strand, within HP15_3734at 3955.550 kb on - strand, within HP15_3734at 3955.636 kb on - strandat 3955.648 kb on + strandat 3955.648 kb on - strandat 3955.692 kb on + strandat 3955.698 kb on + strandat 3955.706 kb on - strandat 3955.814 kb on - strand, within HP15_3735at 3955.902 kb on + strand, within HP15_3735at 3956.115 kb on - strand, within HP15_3735at 3956.115 kb on - strand, within HP15_3735at 3956.128 kb on - strand, within HP15_3735at 3956.150 kb on - strand, within HP15_3735at 3956.221 kb on + strandat 3956.229 kb on - strandat 3956.257 kb on - strandat 3956.271 kb on + strandat 3956.311 kb on - strandat 3956.332 kb on - strandat 3956.542 kb on - strand, within HP15_3736at 3956.565 kb on - strand, within HP15_3736at 3956.633 kb on + strand, within HP15_3736at 3956.818 kb on - strand, within HP15_3736at 3957.051 kb on + strandat 3957.064 kb on - strandat 3957.065 kb on + strandat 3957.072 kb on - strandat 3957.074 kb on - strandat 3957.076 kb on + strandat 3957.185 kb on + strandat 3957.734 kb on + strand, within HP15_3737at 3957.735 kb on + strand, within HP15_3737at 3957.742 kb on - strand, within HP15_3737at 3957.749 kb on + strand, within HP15_3737at 3957.815 kb on + strand, within HP15_3737at 3957.818 kb on - strand, within HP15_3737at 3957.828 kb on - strand, within HP15_3737

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 76.57 mM
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3,955,330 + HP15_3734 0.36 +0.1
3,955,486 + HP15_3734 0.71 +0.1
3,955,494 - HP15_3734 0.73 -0.2
3,955,510 - HP15_3734 0.76 +0.5
3,955,550 - HP15_3734 0.85 +0.8
3,955,636 - +0.6
3,955,648 + +0.7
3,955,648 - +0.2
3,955,692 + +0.2
3,955,698 + +0.2
3,955,706 - -0.4
3,955,814 - HP15_3735 0.27 +0.3
3,955,902 + HP15_3735 0.43 +0.0
3,956,115 - HP15_3735 0.80 -0.0
3,956,115 - HP15_3735 0.80 +0.6
3,956,128 - HP15_3735 0.83 +0.4
3,956,150 - HP15_3735 0.87 +0.2
3,956,221 + -0.3
3,956,229 - +0.3
3,956,257 - +0.1
3,956,271 + -0.4
3,956,311 - -0.7
3,956,332 - -0.2
3,956,542 - HP15_3736 0.43 -0.9
3,956,565 - HP15_3736 0.47 +0.0
3,956,633 + HP15_3736 0.57 +0.2
3,956,818 - HP15_3736 0.87 -1.1
3,957,051 + -0.2
3,957,064 - +0.1
3,957,065 + +0.6
3,957,072 - +0.2
3,957,074 - -0.1
3,957,076 + +0.0
3,957,185 + -0.0
3,957,734 + HP15_3737 0.38 +1.5
3,957,735 + HP15_3737 0.38 +0.0
3,957,742 - HP15_3737 0.38 +0.6
3,957,749 + HP15_3737 0.39 -0.3
3,957,815 + HP15_3737 0.43 +0.2
3,957,818 - HP15_3737 0.43 +0.2
3,957,828 - HP15_3737 0.44 -0.0

Or see this region's nucleotide sequence