Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3649

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,808,463	+		Psest_3648	0.13	+0.1
3,808,576	+		Psest_3648	0.24	-1.7
3,808,576	+		Psest_3648	0.24	-1.3
3,808,577	-		Psest_3648	0.24	-2.0
3,808,634	+		Psest_3648	0.29	-0.8
3,808,634	+		Psest_3648	0.29	-1.9
3,808,635	-		Psest_3648	0.29	-0.3
3,808,854	+		Psest_3648	0.50	-2.6
3,808,854	+		Psest_3648	0.50	-2.0
3,808,854	+		Psest_3648	0.50	-1.4
3,808,855	-		Psest_3648	0.50	-0.6
3,808,855	-		Psest_3648	0.50	-2.7
3,808,855	-		Psest_3648	0.50	-2.1
3,808,855	-		Psest_3648	0.50	-1.9
3,808,855	-		Psest_3648	0.50	-2.3
3,808,855	-		Psest_3648	0.50	-2.1
3,808,858	+		Psest_3648	0.51	-3.2
3,808,858	+		Psest_3648	0.51	-0.4
3,808,858	+		Psest_3648	0.51	-1.5
3,809,109	+		Psest_3648	0.75	-1.1
3,809,368	-				-0.6
3,809,466	+		Psest_3649	0.16	-1.3
3,809,466	+		Psest_3649	0.16	-0.1
3,809,466	+		Psest_3649	0.16	-1.1
3,809,466	+		Psest_3649	0.16	-0.8
3,809,466	+		Psest_3649	0.16	+0.2
3,809,466	+		Psest_3649	0.16	+1.8
3,809,466	+		Psest_3649	0.16	-0.8
3,809,466	+		Psest_3649	0.16	-2.3
3,809,466	+		Psest_3649	0.16	-1.7
3,809,467	-		Psest_3649	0.16	-1.0
3,809,467	-		Psest_3649	0.16	-1.2
3,809,467	-		Psest_3649	0.16	-1.4
3,809,467	-		Psest_3649	0.16	-2.3
3,809,467	-		Psest_3649	0.16	-0.3
3,809,467	-		Psest_3649	0.16	-0.4
3,809,467	-		Psest_3649	0.16	-0.9
3,809,467	-		Psest_3649	0.16	-2.3
3,809,467	-		Psest_3649	0.16	+1.5
3,809,467	-		Psest_3649	0.16	-1.5
3,809,468	+		Psest_3649	0.16	-1.0
3,809,468	+		Psest_3649	0.16	-2.0
3,809,469	-		Psest_3649	0.16	-1.7
3,809,685	+		Psest_3649	0.53	-1.4
3,809,685	+		Psest_3649	0.53	-1.4
3,809,685	+		Psest_3649	0.53	-1.1
3,809,685	+		Psest_3649	0.53	-1.9
3,809,685	+		Psest_3649	0.53	-2.5
3,809,685	+		Psest_3649	0.53	-1.4
3,809,686	-		Psest_3649	0.53	-2.6
3,809,686	-		Psest_3649	0.53	-0.6
3,809,686	-		Psest_3649	0.53	-0.9
3,809,914	+				+0.6
3,809,914	+				-0.3
3,809,914	+				-1.5
3,809,915	-				-1.2
3,809,929	+				-2.2
3,809,929	+				-1.1
3,809,929	+				-1.1
3,809,929	+				-2.0
3,809,929	+				-1.6
3,809,929	+				-0.6
3,809,929	+				-1.3
3,809,929	+				-1.0
3,809,929	+				-1.3
3,809,929	+				+0.3
3,809,930	-				-1.9
3,809,930	-				-0.5
3,809,930	-				-1.2
3,809,930	-				-0.6
3,809,930	-				-1.1
3,809,930	-				-2.3
3,809,930	-				-1.4
3,809,930	-				-0.9
3,809,930	-				-0.9
3,809,933	+				-0.9
3,809,933	+				+0.2
3,809,934	-				-0.9
3,809,944	+				-1.7
3,809,945	-				-1.3
3,809,945	-				-0.4
3,809,945	-				-0.8
3,809,945	-				-1.6
3,809,945	-				-0.0
3,809,945	-				-1.1
3,809,945	-				-2.6
3,809,945	-				-0.8
3,809,948	+				+0.2
3,810,627	+		Psest_3650	0.44	-1.0
3,810,627	+		Psest_3650	0.44	-2.2
3,810,627	+		Psest_3650	0.44	-1.6
3,810,627	+		Psest_3650	0.44	-2.1
3,810,627	+		Psest_3650	0.44	-1.5
3,810,627	+		Psest_3650	0.44	-0.4
3,810,627	+		Psest_3650	0.44	-1.4
3,810,627	+		Psest_3650	0.44	-2.6
3,810,627	+		Psest_3650	0.44	-1.1
3,810,627	+		Psest_3650	0.44	-1.1
3,810,627	+		Psest_3650	0.44	-1.9
3,810,627	+		Psest_3650	0.44	-0.5
3,810,627	+		Psest_3650	0.44	-1.9
3,810,628	-		Psest_3650	0.44	-1.6
3,810,628	-		Psest_3650	0.44	-2.9
3,810,628	-		Psest_3650	0.44	-2.2
3,810,628	-		Psest_3650	0.44	-2.3
3,810,628	-		Psest_3650	0.44	-0.0
3,810,628	-		Psest_3650	0.44	-0.8
3,810,628	-		Psest_3650	0.44	-0.6
3,810,628	-		Psest_3650	0.44	-0.6
3,810,628	-		Psest_3650	0.44	+0.9
3,810,628	-		Psest_3650	0.44	-0.7
3,810,628	-		Psest_3650	0.44	+0.2
3,810,628	-		Psest_3650	0.44	-1.3
3,810,628	-		Psest_3650	0.44	-0.4
3,810,628	-		Psest_3650	0.44	-1.3
3,810,628	-		Psest_3650	0.44	-1.2
3,810,628	-		Psest_3650	0.44	-0.6
3,810,633	+		Psest_3650	0.45	+0.2
3,810,633	+		Psest_3650	0.45	-2.9
3,810,633	+		Psest_3650	0.45	-2.8
3,810,634	-		Psest_3650	0.45	-0.6
3,810,634	-		Psest_3650	0.45	+0.6
3,810,634	-		Psest_3650	0.45	-1.2
3,810,634	-		Psest_3650	0.45	-0.4
3,810,634	-		Psest_3650	0.45	-1.1
3,810,747	+		Psest_3650	0.52	-2.1
3,810,747	+		Psest_3650	0.52	-0.9
3,810,747	+		Psest_3650	0.52	-2.4
3,810,747	+		Psest_3650	0.52	-1.8
3,810,747	+		Psest_3650	0.52	-0.6
3,810,747	+		Psest_3650	0.52	-1.2
3,810,747	+		Psest_3650	0.52	-1.4
3,810,748	-		Psest_3650	0.52	-0.6
3,810,748	-		Psest_3650	0.52	-1.3
3,810,748	-		Psest_3650	0.52	-0.8
3,810,748	-		Psest_3650	0.52	-0.6
3,810,748	-		Psest_3650	0.52	-1.5
3,810,748	-		Psest_3650	0.52	-1.8
3,810,748	-		Psest_3650	0.52	-0.8
3,810,748	-		Psest_3650	0.52	-1.4
3,810,748	-		Psest_3650	0.52	-0.3
3,810,748	-		Psest_3650	0.52	-1.1
3,810,913	-		Psest_3650	0.64	-2.5