Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2765 and Psest_2766 are separated by 162 nucleotides Psest_2766 and Psest_2767 are separated by 5 nucleotides Psest_2767 and Psest_2768 are separated by 88 nucleotides
Psest_2765: Psest_2765 - Collagenase and related proteases, at 2,959,976 to 2,961,976
_2765
Psest_2766: Psest_2766 - hypothetical protein, at 2,962,139 to 2,962,735
_2766
Psest_2767: Psest_2767 - Uncharacterized conserved protein, at 2,962,741 to 2,963,472
_2767
Psest_2768: Psest_2768 - Kef-type K+ transport systems, predicted NAD-binding component, at 2,963,561 to 2,964,349
_2768
Position (kb)
2962
2963 Strain fitness (log2 ratio)
-2
-1
0
1 at 2961.404 kb on + strand, within Psest_2765 at 2961.404 kb on + strand, within Psest_2765 at 2961.405 kb on - strand, within Psest_2765 at 2961.405 kb on - strand, within Psest_2765 at 2961.405 kb on - strand, within Psest_2765 at 2961.593 kb on + strand, within Psest_2765 at 2961.594 kb on - strand, within Psest_2765 at 2961.594 kb on - strand, within Psest_2765 at 2961.594 kb on - strand, within Psest_2765 at 2961.602 kb on + strand, within Psest_2765 at 2961.602 kb on + strand, within Psest_2765 at 2961.602 kb on + strand, within Psest_2765 at 2961.603 kb on - strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.626 kb on + strand, within Psest_2765 at 2961.627 kb on - strand, within Psest_2765 at 2961.627 kb on - strand, within Psest_2765 at 2961.882 kb on + strand at 2961.882 kb on + strand at 2961.883 kb on - strand at 2961.883 kb on - strand at 2961.883 kb on - strand at 2962.059 kb on + strand at 2962.419 kb on + strand, within Psest_2766 at 2962.886 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.898 kb on + strand, within Psest_2767 at 2962.899 kb on - strand, within Psest_2767 at 2962.899 kb on - strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.902 kb on + strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2962.903 kb on - strand, within Psest_2767 at 2963.260 kb on + strand, within Psest_2767 at 2963.260 kb on + strand, within Psest_2767 at 2963.261 kb on - strand, within Psest_2767 at 2963.261 kb on - strand, within Psest_2767 at 2963.261 kb on - strand, within Psest_2767 at 2963.592 kb on + strand at 2963.592 kb on + strand at 2963.592 kb on + strand at 2963.593 kb on - strand at 2963.593 kb on - strand at 2963.615 kb on + strand at 2963.615 kb on + strand at 2963.615 kb on + strand at 2963.615 kb on + strand at 2963.667 kb on + strand, within Psest_2768 at 2963.685 kb on - strand, within Psest_2768
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,961,404 + Psest_2765 0.71 -0.2 2,961,404 + Psest_2765 0.71 -0.0 2,961,405 - Psest_2765 0.71 -0.6 2,961,405 - Psest_2765 0.71 +1.0 2,961,405 - Psest_2765 0.71 -0.4 2,961,593 + Psest_2765 0.81 +0.9 2,961,594 - Psest_2765 0.81 +0.4 2,961,594 - Psest_2765 0.81 -0.2 2,961,594 - Psest_2765 0.81 +0.8 2,961,602 + Psest_2765 0.81 -0.2 2,961,602 + Psest_2765 0.81 -0.1 2,961,602 + Psest_2765 0.81 +0.3 2,961,603 - Psest_2765 0.81 +0.7 2,961,626 + Psest_2765 0.82 +0.2 2,961,626 + Psest_2765 0.82 +0.2 2,961,626 + Psest_2765 0.82 +1.2 2,961,626 + Psest_2765 0.82 -0.2 2,961,626 + Psest_2765 0.82 -0.2 2,961,627 - Psest_2765 0.83 +0.2 2,961,627 - Psest_2765 0.83 +1.2 2,961,882 + -0.0 2,961,882 + +0.8 2,961,883 - -0.4 2,961,883 - +0.4 2,961,883 - -0.4 2,962,059 + +0.9 2,962,419 + Psest_2766 0.47 -0.8 2,962,886 + Psest_2767 0.20 -0.3 2,962,898 + Psest_2767 0.21 -0.3 2,962,898 + Psest_2767 0.21 -0.4 2,962,898 + Psest_2767 0.21 +0.2 2,962,898 + Psest_2767 0.21 -0.3 2,962,899 - Psest_2767 0.22 +0.3 2,962,899 - Psest_2767 0.22 +0.2 2,962,902 + Psest_2767 0.22 -0.4 2,962,902 + Psest_2767 0.22 -0.6 2,962,902 + Psest_2767 0.22 +0.9 2,962,902 + Psest_2767 0.22 -0.1 2,962,902 + Psest_2767 0.22 +0.5 2,962,902 + Psest_2767 0.22 -0.1 2,962,902 + Psest_2767 0.22 +0.9 2,962,902 + Psest_2767 0.22 -0.3 2,962,902 + Psest_2767 0.22 -0.4 2,962,902 + Psest_2767 0.22 +0.2 2,962,902 + Psest_2767 0.22 -0.2 2,962,902 + Psest_2767 0.22 +0.3 2,962,902 + Psest_2767 0.22 +0.2 2,962,902 + Psest_2767 0.22 +0.3 2,962,902 + Psest_2767 0.22 +0.0 2,962,903 - Psest_2767 0.22 -1.5 2,962,903 - Psest_2767 0.22 -0.0 2,962,903 - Psest_2767 0.22 -0.7 2,962,903 - Psest_2767 0.22 +0.7 2,963,260 + Psest_2767 0.71 -0.6 2,963,260 + Psest_2767 0.71 -0.3 2,963,261 - Psest_2767 0.71 -0.8 2,963,261 - Psest_2767 0.71 -2.4 2,963,261 - Psest_2767 0.71 -0.2 2,963,592 + +0.1 2,963,592 + -0.1 2,963,592 + +0.4 2,963,593 - +0.2 2,963,593 - -0.6 2,963,615 + +0.6 2,963,615 + -0.4 2,963,615 + +1.4 2,963,615 + +0.1 2,963,667 + Psest_2768 0.13 -0.2 2,963,685 - Psest_2768 0.16 -1.8
Or see this region's nucleotide sequence