Experiment: m.b. Cholin acetate 76.57 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2305 and HP15_2306 are separated by 158 nucleotides HP15_2306 and HP15_2307 are separated by 2 nucleotides HP15_2307 and HP15_2308 overlap by 20 nucleotides
HP15_2305: HP15_2305 - flagellar biosynthesis protein A, at 2,426,023 to 2,428,263
_2305
HP15_2306: HP15_2306 - uracil phosphoribosyltransferase, at 2,428,422 to 2,429,060
_2306
HP15_2307: HP15_2307 - xanthine/uracil permease, at 2,429,063 to 2,430,319
_2307
HP15_2308: HP15_2308 - O-methyltransferase, at 2,430,300 to 2,431,154
_2308
Position (kb)
2429
2430
2431 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2428.064 kb on - strand at 2428.418 kb on + strand at 2428.426 kb on - strand at 2428.445 kb on - strand at 2428.533 kb on + strand, within HP15_2306 at 2428.533 kb on + strand, within HP15_2306 at 2428.591 kb on + strand, within HP15_2306 at 2428.599 kb on - strand, within HP15_2306 at 2428.619 kb on - strand, within HP15_2306 at 2428.688 kb on - strand, within HP15_2306 at 2428.966 kb on + strand, within HP15_2306 at 2428.966 kb on + strand, within HP15_2306 at 2429.188 kb on + strand at 2429.222 kb on - strand, within HP15_2307 at 2429.374 kb on - strand, within HP15_2307 at 2429.448 kb on + strand, within HP15_2307 at 2429.480 kb on + strand, within HP15_2307 at 2429.527 kb on - strand, within HP15_2307 at 2429.763 kb on + strand, within HP15_2307 at 2429.771 kb on - strand, within HP15_2307 at 2429.776 kb on - strand, within HP15_2307 at 2429.922 kb on + strand, within HP15_2307 at 2429.965 kb on + strand, within HP15_2307 at 2429.973 kb on - strand, within HP15_2307 at 2430.002 kb on + strand, within HP15_2307 at 2430.017 kb on + strand, within HP15_2307 at 2430.040 kb on - strand, within HP15_2307 at 2430.090 kb on - strand, within HP15_2307 at 2430.175 kb on - strand, within HP15_2307 at 2430.249 kb on + strand at 2430.286 kb on + strand at 2430.286 kb on + strand at 2430.344 kb on + strand at 2430.355 kb on - strand at 2430.396 kb on - strand, within HP15_2308 at 2430.707 kb on + strand, within HP15_2308 at 2430.715 kb on - strand, within HP15_2308 at 2430.933 kb on + strand, within HP15_2308 at 2430.954 kb on - strand, within HP15_2308 at 2430.956 kb on + strand, within HP15_2308 at 2430.964 kb on - strand, within HP15_2308 at 2431.261 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 76.57 mM remove 2,428,064 - +0.3 2,428,418 + -0.5 2,428,426 - -1.1 2,428,445 - -0.9 2,428,533 + HP15_2306 0.17 -2.4 2,428,533 + HP15_2306 0.17 +0.3 2,428,591 + HP15_2306 0.26 -1.5 2,428,599 - HP15_2306 0.28 -1.6 2,428,619 - HP15_2306 0.31 -1.5 2,428,688 - HP15_2306 0.42 -0.4 2,428,966 + HP15_2306 0.85 +0.5 2,428,966 + HP15_2306 0.85 -2.2 2,429,188 + -0.6 2,429,222 - HP15_2307 0.13 -0.9 2,429,374 - HP15_2307 0.25 -2.0 2,429,448 + HP15_2307 0.31 +0.3 2,429,480 + HP15_2307 0.33 -0.7 2,429,527 - HP15_2307 0.37 -1.1 2,429,763 + HP15_2307 0.56 -2.7 2,429,771 - HP15_2307 0.56 -1.2 2,429,776 - HP15_2307 0.57 -0.7 2,429,922 + HP15_2307 0.68 -1.9 2,429,965 + HP15_2307 0.72 -0.0 2,429,973 - HP15_2307 0.72 +0.0 2,430,002 + HP15_2307 0.75 -0.9 2,430,017 + HP15_2307 0.76 -0.5 2,430,040 - HP15_2307 0.78 -1.2 2,430,090 - HP15_2307 0.82 -1.2 2,430,175 - HP15_2307 0.88 +1.9 2,430,249 + -1.0 2,430,286 + -0.9 2,430,286 + -0.2 2,430,344 + -0.4 2,430,355 - -0.4 2,430,396 - HP15_2308 0.11 +0.3 2,430,707 + HP15_2308 0.48 +0.1 2,430,715 - HP15_2308 0.49 +0.0 2,430,933 + HP15_2308 0.74 +0.5 2,430,954 - HP15_2308 0.76 -0.1 2,430,956 + HP15_2308 0.77 -0.3 2,430,964 - HP15_2308 0.78 +2.7 2,431,261 + -0.4
Or see this region's nucleotide sequence