Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0224 and Psest_0225 are separated by 87 nucleotides Psest_0225 and Psest_0226 are separated by 29 nucleotides
Psest_0224: Psest_0224 - Transcriptional regulator, at 232,670 to 233,584
_0224
Psest_0225: Psest_0225 - Predicted permease, DMT superfamily, at 233,672 to 234,583
_0225
Psest_0226: Psest_0226 - Domain of unknown function (DUF3482)./GTPase of unknown function., at 234,613 to 235,986
_0226
Position (kb) 233
234
235 Strain fitness (log2 ratio) -2
-1
0
1
2 at 232.698 kb on + strand at 232.698 kb on + strand at 232.699 kb on - strand at 232.770 kb on + strand, within Psest_0224 at 232.770 kb on + strand, within Psest_0224 at 232.770 kb on + strand, within Psest_0224 at 232.771 kb on - strand, within Psest_0224 at 232.771 kb on - strand, within Psest_0224 at 232.771 kb on - strand, within Psest_0224 at 232.782 kb on + strand, within Psest_0224 at 232.783 kb on - strand, within Psest_0224 at 232.914 kb on + strand, within Psest_0224 at 232.914 kb on + strand, within Psest_0224 at 232.915 kb on - strand, within Psest_0224 at 232.995 kb on + strand, within Psest_0224 at 232.995 kb on + strand, within Psest_0224 at 232.995 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.005 kb on + strand, within Psest_0224 at 233.006 kb on - strand, within Psest_0224 at 233.006 kb on - strand, within Psest_0224 at 233.006 kb on - strand, within Psest_0224 at 233.055 kb on + strand, within Psest_0224 at 233.262 kb on + strand, within Psest_0224 at 233.370 kb on + strand, within Psest_0224 at 233.370 kb on + strand, within Psest_0224 at 233.370 kb on + strand, within Psest_0224 at 233.371 kb on - strand, within Psest_0224 at 233.371 kb on - strand, within Psest_0224 at 233.550 kb on + strand at 233.550 kb on + strand at 233.551 kb on - strand at 233.551 kb on - strand at 233.551 kb on - strand at 233.680 kb on + strand at 233.680 kb on + strand at 233.680 kb on + strand at 233.681 kb on - strand at 233.681 kb on - strand at 233.681 kb on - strand at 233.681 kb on - strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 233.750 kb on + strand at 234.108 kb on + strand, within Psest_0225 at 234.108 kb on + strand, within Psest_0225 at 234.109 kb on - strand, within Psest_0225 at 234.109 kb on - strand, within Psest_0225 at 234.321 kb on - strand, within Psest_0225 at 234.582 kb on - strand at 234.924 kb on - strand, within Psest_0226 at 235.073 kb on - strand, within Psest_0226 at 235.161 kb on - strand, within Psest_0226 at 235.161 kb on - strand, within Psest_0226
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 232,698 + -1.1 232,698 + -1.4 232,699 - +0.9 232,770 + Psest_0224 0.11 -1.2 232,770 + Psest_0224 0.11 -0.8 232,770 + Psest_0224 0.11 -0.2 232,771 - Psest_0224 0.11 -0.9 232,771 - Psest_0224 0.11 +0.1 232,771 - Psest_0224 0.11 +0.7 232,782 + Psest_0224 0.12 +0.6 232,783 - Psest_0224 0.12 +0.3 232,914 + Psest_0224 0.27 +0.3 232,914 + Psest_0224 0.27 +1.2 232,915 - Psest_0224 0.27 +0.6 232,995 + Psest_0224 0.36 +1.3 232,995 + Psest_0224 0.36 +0.4 232,995 + Psest_0224 0.36 -0.2 233,005 + Psest_0224 0.37 -0.4 233,005 + Psest_0224 0.37 +0.8 233,005 + Psest_0224 0.37 +0.5 233,005 + Psest_0224 0.37 +2.2 233,005 + Psest_0224 0.37 +0.8 233,005 + Psest_0224 0.37 +1.8 233,005 + Psest_0224 0.37 -0.6 233,006 - Psest_0224 0.37 -1.0 233,006 - Psest_0224 0.37 +0.2 233,006 - Psest_0224 0.37 +0.2 233,055 + Psest_0224 0.42 +1.2 233,262 + Psest_0224 0.65 -0.3 233,370 + Psest_0224 0.77 -1.4 233,370 + Psest_0224 0.77 -0.4 233,370 + Psest_0224 0.77 -0.1 233,371 - Psest_0224 0.77 +0.8 233,371 - Psest_0224 0.77 -2.6 233,550 + +0.2 233,550 + -0.3 233,551 - +2.2 233,551 - +1.2 233,551 - +2.2 233,680 + +1.2 233,680 + +1.3 233,680 + -0.8 233,681 - -0.4 233,681 - +0.0 233,681 - +0.6 233,681 - +1.2 233,750 + +1.7 233,750 + -0.4 233,750 + +1.2 233,750 + +0.7 233,750 + +0.8 233,750 + +0.6 233,750 + +1.2 233,750 + +0.9 233,750 + +0.6 233,750 + +1.2 234,108 + Psest_0225 0.48 +2.2 234,108 + Psest_0225 0.48 -2.2 234,109 - Psest_0225 0.48 -0.4 234,109 - Psest_0225 0.48 -0.8 234,321 - Psest_0225 0.71 +0.7 234,582 - +0.6 234,924 - Psest_0226 0.23 +1.2 235,073 - Psest_0226 0.33 +0.2 235,161 - Psest_0226 0.40 +0.4 235,161 - Psest_0226 0.40 -1.2
Or see this region's nucleotide sequence