Strain Fitness in Marinobacter adhaerens HP15 around HP15_2076

Experiment: m.b. Cholin acetate 76.57 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2075 and HP15_2076 are separated by 142 nucleotidesHP15_2076 and HP15_2077 are separated by 203 nucleotidesHP15_2077 and HP15_2078 are separated by 0 nucleotides HP15_2075: HP15_2075 - MoxR protein, at 2,175,181 to 2,176,092 _2075 HP15_2076: HP15_2076 - secreted protein containing thioredoxin reductase domain, at 2,176,235 to 2,177,188 _2076 HP15_2077: HP15_2077 - leucyl/phenylalanyl-tRNA-protein transferase, at 2,177,392 to 2,178,105 _2077 HP15_2078: HP15_2078 - arginyl-tRNA-protein transferase, at 2,178,106 to 2,178,819 _2078 Position (kb) 2176 2177 2178Strain fitness (log2 ratio) -1 0 1 2at 2175.339 kb on + strand, within HP15_2075at 2175.347 kb on - strand, within HP15_2075at 2175.457 kb on + strand, within HP15_2075at 2175.528 kb on + strand, within HP15_2075at 2175.616 kb on - strand, within HP15_2075at 2175.635 kb on - strand, within HP15_2075at 2175.643 kb on - strand, within HP15_2075at 2175.726 kb on - strand, within HP15_2075at 2175.779 kb on - strand, within HP15_2075at 2175.795 kb on + strand, within HP15_2075at 2175.840 kb on - strand, within HP15_2075at 2175.936 kb on + strand, within HP15_2075at 2175.936 kb on + strand, within HP15_2075at 2175.939 kb on - strand, within HP15_2075at 2175.981 kb on + strand, within HP15_2075at 2175.989 kb on - strand, within HP15_2075at 2176.016 kb on + strandat 2177.265 kb on - strandat 2177.320 kb on - strandat 2177.359 kb on - strandat 2177.449 kb on + strandat 2177.449 kb on + strandat 2177.449 kb on + strandat 2177.457 kb on - strandat 2177.457 kb on - strandat 2177.701 kb on + strand, within HP15_2077at 2177.753 kb on + strand, within HP15_2077at 2177.812 kb on + strand, within HP15_2077at 2177.850 kb on + strand, within HP15_2077at 2177.931 kb on + strand, within HP15_2077at 2177.931 kb on + strand, within HP15_2077at 2177.939 kb on - strand, within HP15_2077at 2178.081 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 76.57 mM
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2,175,339 + HP15_2075 0.17 +0.3
2,175,347 - HP15_2075 0.18 +0.5
2,175,457 + HP15_2075 0.30 -0.0
2,175,528 + HP15_2075 0.38 +0.2
2,175,616 - HP15_2075 0.48 -0.1
2,175,635 - HP15_2075 0.50 +0.6
2,175,643 - HP15_2075 0.51 -0.0
2,175,726 - HP15_2075 0.60 +1.7
2,175,779 - HP15_2075 0.66 +0.4
2,175,795 + HP15_2075 0.67 +1.2
2,175,840 - HP15_2075 0.72 -0.2
2,175,936 + HP15_2075 0.83 -0.3
2,175,936 + HP15_2075 0.83 +0.0
2,175,939 - HP15_2075 0.83 -0.1
2,175,981 + HP15_2075 0.88 +0.2
2,175,989 - HP15_2075 0.89 -0.4
2,176,016 + +0.2
2,177,265 - +0.7
2,177,320 - -0.3
2,177,359 - +0.0
2,177,449 + +0.1
2,177,449 + -0.2
2,177,449 + +1.1
2,177,457 - +0.1
2,177,457 - +0.7
2,177,701 + HP15_2077 0.43 -0.4
2,177,753 + HP15_2077 0.51 -0.4
2,177,812 + HP15_2077 0.59 +2.1
2,177,850 + HP15_2077 0.64 +0.8
2,177,931 + HP15_2077 0.75 -0.2
2,177,931 + HP15_2077 0.75 -1.0
2,177,939 - HP15_2077 0.77 -0.2
2,178,081 + +0.3

Or see this region's nucleotide sequence