Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2149 and Psest_2150 are separated by 95 nucleotides Psest_2150 and Psest_2151 are separated by 289 nucleotides
Psest_2149: Psest_2149 - Ku protein, prokaryotic, at 2,295,019 to 2,295,900
_2149
Psest_2150: Psest_2150 - DNA polymerase LigD, polymerase domain, at 2,295,996 to 2,296,919
_2150
Psest_2151: Psest_2151 - formate dehydrogenase, alpha subunit, proteobacterial-type, at 2,297,209 to 2,300,274
_2151
Position (kb)
2295
2296
2297 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2295.062 kb on + strand at 2295.217 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.352 kb on + strand, within Psest_2149 at 2295.353 kb on - strand, within Psest_2149 at 2295.385 kb on + strand, within Psest_2149 at 2295.446 kb on + strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.541 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.650 kb on - strand, within Psest_2149 at 2296.110 kb on + strand, within Psest_2150 at 2296.114 kb on - strand, within Psest_2150 at 2296.114 kb on - strand, within Psest_2150 at 2296.821 kb on + strand, within Psest_2150 at 2297.176 kb on + strand at 2297.176 kb on + strand at 2297.176 kb on + strand at 2297.177 kb on - strand at 2297.358 kb on + strand at 2297.358 kb on + strand at 2297.358 kb on + strand at 2297.364 kb on + strand at 2297.364 kb on + strand at 2297.365 kb on - strand at 2297.365 kb on - strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.368 kb on + strand at 2297.369 kb on - strand at 2297.398 kb on + strand at 2297.398 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,295,062 + +0.2 2,295,217 + Psest_2149 0.22 +0.0 2,295,232 + Psest_2149 0.24 +2.3 2,295,232 + Psest_2149 0.24 -0.1 2,295,232 + Psest_2149 0.24 -0.3 2,295,233 - Psest_2149 0.24 +0.2 2,295,233 - Psest_2149 0.24 -0.2 2,295,233 - Psest_2149 0.24 +1.1 2,295,233 - Psest_2149 0.24 -0.3 2,295,233 - Psest_2149 0.24 -1.0 2,295,233 - Psest_2149 0.24 +0.3 2,295,233 - Psest_2149 0.24 -0.5 2,295,334 + Psest_2149 0.36 +0.6 2,295,334 + Psest_2149 0.36 +0.8 2,295,334 + Psest_2149 0.36 -1.0 2,295,335 - Psest_2149 0.36 +0.3 2,295,335 - Psest_2149 0.36 -0.1 2,295,335 - Psest_2149 0.36 -0.8 2,295,335 - Psest_2149 0.36 -0.2 2,295,349 + Psest_2149 0.37 +0.8 2,295,349 + Psest_2149 0.37 -0.5 2,295,350 - Psest_2149 0.38 -0.7 2,295,350 - Psest_2149 0.38 +0.4 2,295,350 - Psest_2149 0.38 -0.3 2,295,350 - Psest_2149 0.38 -1.3 2,295,352 + Psest_2149 0.38 +0.2 2,295,353 - Psest_2149 0.38 -0.6 2,295,385 + Psest_2149 0.41 -0.0 2,295,446 + Psest_2149 0.48 -1.1 2,295,447 - Psest_2149 0.49 -0.7 2,295,447 - Psest_2149 0.49 +1.1 2,295,450 + Psest_2149 0.49 -0.5 2,295,450 + Psest_2149 0.49 -0.7 2,295,450 + Psest_2149 0.49 -0.2 2,295,450 + Psest_2149 0.49 -0.5 2,295,451 - Psest_2149 0.49 -0.2 2,295,451 - Psest_2149 0.49 +0.2 2,295,451 - Psest_2149 0.49 +0.7 2,295,541 + Psest_2149 0.59 +1.4 2,295,649 + Psest_2149 0.71 +0.9 2,295,649 + Psest_2149 0.71 -0.4 2,295,649 + Psest_2149 0.71 +0.4 2,295,649 + Psest_2149 0.71 -0.4 2,295,650 - Psest_2149 0.72 -0.8 2,296,110 + Psest_2150 0.12 -0.3 2,296,114 - Psest_2150 0.13 -2.0 2,296,114 - Psest_2150 0.13 -0.5 2,296,821 + Psest_2150 0.89 +0.5 2,297,176 + -0.9 2,297,176 + +0.2 2,297,176 + -1.2 2,297,177 - -0.2 2,297,358 + +0.1 2,297,358 + +0.4 2,297,358 + +0.2 2,297,364 + -0.5 2,297,364 + +0.5 2,297,365 - +0.1 2,297,365 - -0.5 2,297,368 + -0.5 2,297,368 + -1.5 2,297,368 + -0.4 2,297,368 + +0.5 2,297,368 + +0.0 2,297,369 - -0.2 2,297,398 + -0.3 2,297,398 + -0.4
Or see this region's nucleotide sequence