Experiment: m.b. Cholin acetate 76.57 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_141 and HP15_142 are separated by 166 nucleotides HP15_142 and HP15_143 are separated by 41 nucleotides HP15_143 and HP15_144 are separated by 12 nucleotides HP15_144 and HP15_145 are separated by 3 nucleotides HP15_145 and HP15_146 are separated by 143 nucleotides HP15_146 and HP15_147 are separated by 219 nucleotides
HP15_141: HP15_141 - transcriptional regulator, at 146,140 to 147,564
_141
HP15_142: HP15_142 - conserved hypothetical protein, membrane, at 147,731 to 148,288
_142
HP15_143: HP15_143 - hypothetical protein, at 148,330 to 148,533
_143
HP15_144: HP15_144 - conserved hypothetical protein, at 148,546 to 148,821
_144
HP15_145: HP15_145 - conserved hypothetical protein, membrane, at 148,825 to 149,127
_145
HP15_146: HP15_146 - hypothetical protein, at 149,271 to 149,468
_146
HP15_147: HP15_147 - conserved hypothetical protein, membrane, at 149,688 to 150,164
_147
Position (kb)
148
149 Strain fitness (log2 ratio)
-1
0
1 at 147.630 kb on - strand at 147.747 kb on + strand at 147.755 kb on - strand at 147.779 kb on + strand at 147.792 kb on - strand, within HP15_142 at 147.792 kb on - strand, within HP15_142 at 147.792 kb on - strand, within HP15_142 at 147.810 kb on - strand, within HP15_142 at 147.994 kb on - strand, within HP15_142 at 148.056 kb on + strand, within HP15_142 at 148.078 kb on - strand, within HP15_142 at 148.116 kb on - strand, within HP15_142 at 148.172 kb on + strand, within HP15_142 at 148.249 kb on + strand at 148.257 kb on - strand at 148.298 kb on - strand at 148.332 kb on + strand at 148.337 kb on + strand at 148.340 kb on - strand at 148.387 kb on - strand, within HP15_143 at 148.390 kb on - strand, within HP15_143 at 148.463 kb on - strand, within HP15_143 at 148.484 kb on - strand, within HP15_143 at 148.484 kb on - strand, within HP15_143 at 148.484 kb on - strand, within HP15_143 at 148.641 kb on + strand, within HP15_144 at 148.697 kb on + strand, within HP15_144 at 148.754 kb on - strand, within HP15_144 at 149.084 kb on + strand, within HP15_145 at 149.124 kb on - strand at 149.170 kb on + strand at 149.181 kb on + strand at 149.307 kb on - strand, within HP15_146 at 149.328 kb on + strand, within HP15_146 at 149.336 kb on - strand, within HP15_146 at 149.375 kb on - strand, within HP15_146 at 149.418 kb on + strand, within HP15_146 at 149.428 kb on + strand, within HP15_146 at 149.452 kb on + strand at 149.455 kb on - strand at 149.528 kb on + strand at 149.541 kb on - strand at 149.558 kb on + strand at 149.561 kb on - strand at 149.677 kb on - strand at 149.748 kb on + strand, within HP15_147 at 149.772 kb on + strand, within HP15_147 at 149.784 kb on + strand, within HP15_147 at 149.792 kb on - strand, within HP15_147
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 76.57 mM remove 147,630 - -0.4 147,747 + -0.2 147,755 - -0.1 147,779 + -0.1 147,792 - HP15_142 0.11 -0.1 147,792 - HP15_142 0.11 -0.1 147,792 - HP15_142 0.11 -0.3 147,810 - HP15_142 0.14 +0.1 147,994 - HP15_142 0.47 +0.2 148,056 + HP15_142 0.58 -0.0 148,078 - HP15_142 0.62 +0.7 148,116 - HP15_142 0.69 +0.5 148,172 + HP15_142 0.79 +0.6 148,249 + -0.3 148,257 - -0.9 148,298 - -0.2 148,332 + -0.5 148,337 + -0.1 148,340 - +0.1 148,387 - HP15_143 0.28 -0.2 148,390 - HP15_143 0.29 -0.1 148,463 - HP15_143 0.65 -0.2 148,484 - HP15_143 0.75 +0.3 148,484 - HP15_143 0.75 +1.3 148,484 - HP15_143 0.75 +0.4 148,641 + HP15_144 0.34 -1.4 148,697 + HP15_144 0.55 +0.1 148,754 - HP15_144 0.75 +0.5 149,084 + HP15_145 0.85 -0.7 149,124 - -0.1 149,170 + -0.5 149,181 + +0.5 149,307 - HP15_146 0.18 +0.3 149,328 + HP15_146 0.29 -0.4 149,336 - HP15_146 0.33 -0.4 149,375 - HP15_146 0.53 +0.4 149,418 + HP15_146 0.74 -0.2 149,428 + HP15_146 0.79 -0.6 149,452 + -0.3 149,455 - +0.2 149,528 + -0.4 149,541 - -0.3 149,558 + -0.3 149,561 - -0.2 149,677 - -1.2 149,748 + HP15_147 0.13 +0.1 149,772 + HP15_147 0.18 -0.2 149,784 + HP15_147 0.20 +0.9 149,792 - HP15_147 0.22 +0.5
Or see this region's nucleotide sequence