Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1418 and Psest_1419 are separated by 96 nucleotides Psest_1419 and Psest_1420 are separated by 113 nucleotides Psest_1420 and Psest_1421 overlap by 4 nucleotides
Psest_1418: Psest_1418 - Transposase and inactivated derivatives, at 1,526,614 to 1,527,984
_1418
Psest_1419: Psest_1419 - Transcriptional regulator, at 1,528,081 to 1,528,977
_1419
Psest_1420: Psest_1420 - Lactoylglutathione lyase and related lyases, at 1,529,091 to 1,529,519
_1420
Psest_1421: Psest_1421 - Glutathione S-transferase, at 1,529,516 to 1,530,103
_1421
Position (kb)
1528
1529 Strain fitness (log2 ratio)
-2
-1
0
1 at 1528.083 kb on - strand at 1528.223 kb on - strand, within Psest_1419 at 1528.259 kb on + strand, within Psest_1419 at 1528.260 kb on - strand, within Psest_1419 at 1528.260 kb on - strand, within Psest_1419 at 1528.662 kb on - strand, within Psest_1419 at 1528.662 kb on - strand, within Psest_1419 at 1528.662 kb on - strand, within Psest_1419 at 1528.840 kb on + strand, within Psest_1419 at 1528.841 kb on - strand, within Psest_1419 at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.008 kb on + strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.009 kb on - strand at 1529.031 kb on + strand at 1529.032 kb on - strand at 1529.525 kb on + strand at 1529.525 kb on + strand at 1529.525 kb on + strand at 1529.526 kb on - strand at 1529.526 kb on - strand at 1529.552 kb on + strand at 1529.552 kb on + strand at 1529.553 kb on - strand at 1529.553 kb on - strand at 1529.553 kb on - strand at 1529.553 kb on - strand at 1529.695 kb on + strand, within Psest_1421 at 1529.726 kb on + strand, within Psest_1421 at 1529.727 kb on - strand, within Psest_1421
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,528,083 - -0.3 1,528,223 - Psest_1419 0.16 -0.9 1,528,259 + Psest_1419 0.20 +0.3 1,528,260 - Psest_1419 0.20 -0.6 1,528,260 - Psest_1419 0.20 -1.3 1,528,662 - Psest_1419 0.65 -0.6 1,528,662 - Psest_1419 0.65 +0.2 1,528,662 - Psest_1419 0.65 +0.1 1,528,840 + Psest_1419 0.85 -0.7 1,528,841 - Psest_1419 0.85 -1.3 1,529,008 + -1.4 1,529,008 + +0.1 1,529,008 + +1.0 1,529,008 + +0.2 1,529,008 + +0.5 1,529,008 + -0.6 1,529,008 + +0.2 1,529,008 + -0.4 1,529,008 + -0.8 1,529,008 + -0.6 1,529,008 + -0.8 1,529,008 + -0.2 1,529,008 + +0.3 1,529,008 + -0.5 1,529,008 + +0.0 1,529,008 + -1.5 1,529,008 + +1.0 1,529,008 + -2.0 1,529,008 + -0.1 1,529,008 + -0.4 1,529,008 + -0.1 1,529,008 + -0.7 1,529,008 + -0.1 1,529,008 + -0.1 1,529,008 + +0.5 1,529,009 - +0.0 1,529,009 - -1.8 1,529,009 - -0.4 1,529,009 - +0.3 1,529,009 - -0.4 1,529,009 - +0.6 1,529,009 - -0.8 1,529,009 - -0.7 1,529,009 - -1.4 1,529,009 - +0.1 1,529,009 - -0.3 1,529,009 - -0.5 1,529,009 - +1.7 1,529,009 - -0.1 1,529,031 + +0.2 1,529,032 - +0.6 1,529,525 + -1.6 1,529,525 + +0.7 1,529,525 + -0.9 1,529,526 - +0.1 1,529,526 - -0.4 1,529,552 + +0.9 1,529,552 + +0.8 1,529,553 - -0.1 1,529,553 - -1.2 1,529,553 - -0.6 1,529,553 - +0.3 1,529,695 + Psest_1421 0.30 +0.2 1,529,726 + Psest_1421 0.36 +0.0 1,529,727 - Psest_1421 0.36 +0.3
Or see this region's nucleotide sequence