Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1074 and Psest_1075 are separated by 409 nucleotides Psest_1075 and Psest_1076 are separated by 77 nucleotides
Psest_1074: Psest_1074 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 1,162,493 to 1,163,578
_1074
Psest_1075: Psest_1075 - Predicted transcriptional regulators, at 1,163,988 to 1,164,386
_1075
Psest_1076: Psest_1076 - acetyl-CoA acetyltransferases, at 1,164,464 to 1,165,645
_1076
Position (kb)
1163
1164
1165 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1163.003 kb on + strand, within Psest_1074 at 1163.151 kb on + strand, within Psest_1074 at 1163.151 kb on + strand, within Psest_1074 at 1163.152 kb on - strand, within Psest_1074 at 1163.188 kb on - strand, within Psest_1074 at 1163.188 kb on - strand, within Psest_1074 at 1163.188 kb on - strand, within Psest_1074 at 1163.191 kb on - strand, within Psest_1074 at 1163.191 kb on - strand, within Psest_1074 at 1163.191 kb on - strand, within Psest_1074 at 1163.238 kb on + strand, within Psest_1074 at 1163.287 kb on - strand, within Psest_1074 at 1163.358 kb on + strand, within Psest_1074 at 1163.361 kb on + strand, within Psest_1074 at 1163.361 kb on + strand, within Psest_1074 at 1163.362 kb on - strand, within Psest_1074 at 1163.969 kb on + strand at 1163.970 kb on - strand at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.313 kb on + strand, within Psest_1075 at 1164.314 kb on - strand, within Psest_1075 at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.366 kb on - strand at 1164.366 kb on - strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.371 kb on - strand at 1164.488 kb on + strand at 1165.143 kb on + strand, within Psest_1076 at 1165.143 kb on + strand, within Psest_1076 at 1165.144 kb on - strand, within Psest_1076 at 1165.182 kb on + strand, within Psest_1076 at 1165.278 kb on + strand, within Psest_1076 at 1165.278 kb on + strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,163,003 + Psest_1074 0.47 -0.4 1,163,151 + Psest_1074 0.61 -0.4 1,163,151 + Psest_1074 0.61 +1.9 1,163,152 - Psest_1074 0.61 +0.7 1,163,188 - Psest_1074 0.64 -0.6 1,163,188 - Psest_1074 0.64 -0.2 1,163,188 - Psest_1074 0.64 -0.3 1,163,191 - Psest_1074 0.64 +0.6 1,163,191 - Psest_1074 0.64 +2.4 1,163,191 - Psest_1074 0.64 -0.0 1,163,238 + Psest_1074 0.69 +1.2 1,163,287 - Psest_1074 0.73 +0.8 1,163,358 + Psest_1074 0.80 +0.5 1,163,361 + Psest_1074 0.80 +0.6 1,163,361 + Psest_1074 0.80 +2.7 1,163,362 - Psest_1074 0.80 +0.4 1,163,969 + +0.2 1,163,970 - +0.2 1,164,262 + Psest_1075 0.69 -1.8 1,164,262 + Psest_1075 0.69 +1.2 1,164,262 + Psest_1075 0.69 -0.2 1,164,262 + Psest_1075 0.69 +0.4 1,164,263 - Psest_1075 0.69 -0.2 1,164,263 - Psest_1075 0.69 -1.8 1,164,263 - Psest_1075 0.69 +3.2 1,164,263 - Psest_1075 0.69 -0.0 1,164,263 - Psest_1075 0.69 -0.4 1,164,263 - Psest_1075 0.69 -0.2 1,164,263 - Psest_1075 0.69 -0.9 1,164,313 + Psest_1075 0.81 +0.4 1,164,314 - Psest_1075 0.82 -1.6 1,164,365 + +1.2 1,164,365 + +1.2 1,164,365 + +2.2 1,164,365 + -1.2 1,164,366 - -1.0 1,164,366 - -0.0 1,164,370 + -0.2 1,164,370 + -2.7 1,164,370 + +0.2 1,164,370 + +1.2 1,164,370 + +0.3 1,164,370 + -0.4 1,164,370 + +1.2 1,164,370 + +0.2 1,164,370 + +0.4 1,164,370 + +0.6 1,164,370 + +1.2 1,164,370 + -0.2 1,164,370 + +1.2 1,164,371 - +1.2 1,164,488 + +0.6 1,165,143 + Psest_1076 0.57 +0.2 1,165,143 + Psest_1076 0.57 +0.2 1,165,144 - Psest_1076 0.58 +0.4 1,165,182 + Psest_1076 0.61 -0.1 1,165,278 + Psest_1076 0.69 +0.6 1,165,278 + Psest_1076 0.69 +0.3 1,165,279 - Psest_1076 0.69 +0.7 1,165,279 - Psest_1076 0.69 +0.2 1,165,279 - Psest_1076 0.69 +0.0 1,165,279 - Psest_1076 0.69 +0.2 1,165,279 - Psest_1076 0.69 +1.9 1,165,279 - Psest_1076 0.69 +1.2
Or see this region's nucleotide sequence