Experiment: m.b. Cholin acetate 153.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_751 and HP15_752 are separated by 10 nucleotides HP15_752 and HP15_753 are separated by 5 nucleotides HP15_753 and HP15_754 are separated by 195 nucleotides HP15_754 and HP15_755 are separated by 157 nucleotides
HP15_751: HP15_751 - monothiol glutaredoxin, at 760,856 to 761,188
_751
HP15_752: HP15_752 - protein containing TonB, C-terminal domain, at 761,199 to 761,951
_752
HP15_753: HP15_753 - protein containing DUF1631, at 761,957 to 764,188
_753
HP15_754: HP15_754 - membrane protein containing DUF1282, at 764,384 to 764,986
_754
HP15_755: HP15_755 - Mg2+ and Co2+ transporter CorB, at 765,144 to 766,430
_755
Position (kb) 761
762
763
764
765 Strain fitness (log2 ratio) -2
-1
0
1 at 761.176 kb on + strand at 761.205 kb on - strand at 761.231 kb on + strand at 761.363 kb on - strand, within HP15_752 at 761.418 kb on + strand, within HP15_752 at 761.480 kb on + strand, within HP15_752 at 761.488 kb on - strand, within HP15_752 at 761.586 kb on - strand, within HP15_752 at 761.722 kb on - strand, within HP15_752 at 761.748 kb on - strand, within HP15_752 at 761.748 kb on - strand, within HP15_752 at 761.748 kb on - strand, within HP15_752 at 761.789 kb on - strand, within HP15_752 at 761.836 kb on + strand, within HP15_752 at 761.869 kb on - strand, within HP15_752 at 761.900 kb on + strand at 761.964 kb on + strand at 762.264 kb on + strand, within HP15_753 at 762.264 kb on + strand at 762.355 kb on - strand, within HP15_753 at 762.444 kb on - strand, within HP15_753 at 762.701 kb on - strand, within HP15_753 at 762.878 kb on - strand, within HP15_753 at 763.039 kb on - strand, within HP15_753 at 763.053 kb on - strand, within HP15_753 at 763.226 kb on + strand, within HP15_753 at 763.309 kb on - strand, within HP15_753 at 763.330 kb on + strand, within HP15_753 at 763.501 kb on + strand, within HP15_753 at 763.724 kb on - strand, within HP15_753 at 763.778 kb on - strand, within HP15_753 at 763.793 kb on + strand, within HP15_753 at 763.818 kb on - strand, within HP15_753 at 763.834 kb on + strand, within HP15_753 at 763.834 kb on + strand, within HP15_753 at 763.842 kb on - strand, within HP15_753 at 764.332 kb on + strand at 764.332 kb on + strand at 764.346 kb on + strand at 764.459 kb on - strand, within HP15_754 at 764.543 kb on - strand, within HP15_754 at 764.857 kb on + strand, within HP15_754 at 764.900 kb on - strand, within HP15_754 at 764.908 kb on - strand, within HP15_754 at 764.962 kb on + strand at 764.970 kb on - strand at 765.024 kb on + strand at 765.051 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM remove 761,176 + +1.2 761,205 - -0.3 761,231 + -2.0 761,363 - HP15_752 0.22 -0.1 761,418 + HP15_752 0.29 -0.2 761,480 + HP15_752 0.37 -0.5 761,488 - HP15_752 0.38 -0.4 761,586 - HP15_752 0.51 -0.0 761,722 - HP15_752 0.69 -1.5 761,748 - HP15_752 0.73 +1.7 761,748 - HP15_752 0.73 -0.3 761,748 - HP15_752 0.73 +0.8 761,789 - HP15_752 0.78 -1.2 761,836 + HP15_752 0.85 +0.5 761,869 - HP15_752 0.89 -1.2 761,900 + -0.9 761,964 + -0.5 762,264 + HP15_753 0.14 -1.6 762,264 + -1.3 762,355 - HP15_753 0.18 +0.4 762,444 - HP15_753 0.22 +0.3 762,701 - HP15_753 0.33 -0.1 762,878 - HP15_753 0.41 -0.8 763,039 - HP15_753 0.48 -0.3 763,053 - HP15_753 0.49 +0.4 763,226 + HP15_753 0.57 -1.2 763,309 - HP15_753 0.61 +1.1 763,330 + HP15_753 0.62 +0.2 763,501 + HP15_753 0.69 +0.2 763,724 - HP15_753 0.79 +0.1 763,778 - HP15_753 0.82 +1.6 763,793 + HP15_753 0.82 +0.9 763,818 - HP15_753 0.83 +0.5 763,834 + HP15_753 0.84 -0.7 763,834 + HP15_753 0.84 +0.0 763,842 - HP15_753 0.84 -0.6 764,332 + +0.4 764,332 + +0.3 764,346 + -2.6 764,459 - HP15_754 0.12 +0.1 764,543 - HP15_754 0.26 -0.0 764,857 + HP15_754 0.78 +0.2 764,900 - HP15_754 0.86 -0.7 764,908 - HP15_754 0.87 +0.1 764,962 + -1.7 764,970 - +0.1 765,024 + -0.8 765,051 + -0.2
Or see this region's nucleotide sequence