Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0730 and Psest_0731 are separated by 157 nucleotides Psest_0731 and Psest_0732 are separated by 154 nucleotides
Psest_0730: Psest_0730 - O-6-methylguanine DNA methyltransferase, at 799,537 to 800,577
_0730
Psest_0731: Psest_0731 - Serine/threonine protein kinase involved in cell cycle control, at 800,735 to 801,625
_0731
Psest_0732: Psest_0732 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 801,780 to 803,252
_0732
Position (kb) 800
801
802 Strain fitness (log2 ratio) -1
0
1
2
3 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.971 kb on + strand, within Psest_0730 at 799.972 kb on - strand, within Psest_0730 at 799.972 kb on - strand, within Psest_0730 at 800.429 kb on + strand, within Psest_0730 at 800.429 kb on + strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.430 kb on - strand, within Psest_0730 at 800.654 kb on + strand at 800.654 kb on + strand at 800.654 kb on + strand at 800.655 kb on - strand at 800.655 kb on - strand at 800.655 kb on - strand at 800.655 kb on - strand at 800.747 kb on - strand at 800.826 kb on + strand, within Psest_0731 at 800.826 kb on + strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.827 kb on - strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.828 kb on + strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.829 kb on - strand, within Psest_0731 at 800.870 kb on + strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.871 kb on - strand, within Psest_0731 at 800.912 kb on + strand, within Psest_0731 at 800.938 kb on + strand, within Psest_0731 at 800.939 kb on - strand, within Psest_0731 at 800.939 kb on - strand, within Psest_0731 at 801.240 kb on + strand, within Psest_0731 at 801.240 kb on + strand, within Psest_0731 at 801.368 kb on + strand, within Psest_0731 at 801.369 kb on - strand, within Psest_0731 at 801.689 kb on + strand at 801.690 kb on - strand at 801.856 kb on + strand at 801.856 kb on + strand at 801.857 kb on - strand at 801.857 kb on - strand at 801.857 kb on - strand at 801.857 kb on - strand at 801.857 kb on - strand at 801.857 kb on - strand at 801.857 kb on - strand at 801.857 kb on - strand at 802.120 kb on + strand, within Psest_0732 at 802.121 kb on - strand, within Psest_0732 at 802.121 kb on - strand, within Psest_0732 at 802.121 kb on - strand, within Psest_0732
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 799,971 + Psest_0730 0.42 +0.3 799,971 + Psest_0730 0.42 +0.7 799,971 + Psest_0730 0.42 +0.3 799,971 + Psest_0730 0.42 -0.9 799,971 + Psest_0730 0.42 +0.1 799,972 - Psest_0730 0.42 +0.2 799,972 - Psest_0730 0.42 -0.0 800,429 + Psest_0730 0.86 -0.2 800,429 + Psest_0730 0.86 -1.7 800,430 - Psest_0730 0.86 +0.9 800,430 - Psest_0730 0.86 +0.5 800,430 - Psest_0730 0.86 +1.1 800,430 - Psest_0730 0.86 +0.4 800,430 - Psest_0730 0.86 -0.0 800,654 + +0.5 800,654 + +1.1 800,654 + +0.4 800,655 - +0.7 800,655 - +0.1 800,655 - -1.2 800,655 - +0.1 800,747 - +0.7 800,826 + Psest_0731 0.10 -0.6 800,826 + Psest_0731 0.10 -0.6 800,827 - Psest_0731 0.10 +0.2 800,827 - Psest_0731 0.10 +0.7 800,827 - Psest_0731 0.10 +3.4 800,827 - Psest_0731 0.10 +1.3 800,827 - Psest_0731 0.10 -1.1 800,827 - Psest_0731 0.10 +1.6 800,827 - Psest_0731 0.10 +0.8 800,827 - Psest_0731 0.10 -0.1 800,827 - Psest_0731 0.10 +1.1 800,828 + Psest_0731 0.10 +2.0 800,828 + Psest_0731 0.10 +1.1 800,828 + Psest_0731 0.10 +1.4 800,828 + Psest_0731 0.10 -0.9 800,828 + Psest_0731 0.10 +1.5 800,828 + Psest_0731 0.10 -0.7 800,828 + Psest_0731 0.10 -0.0 800,828 + Psest_0731 0.10 -0.5 800,828 + Psest_0731 0.10 +1.9 800,828 + Psest_0731 0.10 +1.1 800,828 + Psest_0731 0.10 +0.1 800,828 + Psest_0731 0.10 -0.6 800,828 + Psest_0731 0.10 -0.4 800,828 + Psest_0731 0.10 -1.6 800,828 + Psest_0731 0.10 +0.3 800,828 + Psest_0731 0.10 +1.1 800,828 + Psest_0731 0.10 +0.9 800,828 + Psest_0731 0.10 +0.6 800,828 + Psest_0731 0.10 +0.1 800,828 + Psest_0731 0.10 +0.2 800,828 + Psest_0731 0.10 -0.5 800,829 - Psest_0731 0.11 +0.3 800,829 - Psest_0731 0.11 +1.1 800,829 - Psest_0731 0.11 +0.8 800,829 - Psest_0731 0.11 -0.2 800,829 - Psest_0731 0.11 -1.2 800,829 - Psest_0731 0.11 +0.4 800,829 - Psest_0731 0.11 +0.8 800,829 - Psest_0731 0.11 +2.7 800,829 - Psest_0731 0.11 +1.2 800,829 - Psest_0731 0.11 -0.9 800,829 - Psest_0731 0.11 +0.7 800,829 - Psest_0731 0.11 +0.1 800,829 - Psest_0731 0.11 +0.4 800,829 - Psest_0731 0.11 +1.1 800,829 - Psest_0731 0.11 +0.9 800,829 - Psest_0731 0.11 +1.1 800,829 - Psest_0731 0.11 +1.2 800,829 - Psest_0731 0.11 +0.9 800,829 - Psest_0731 0.11 +0.9 800,829 - Psest_0731 0.11 +0.1 800,829 - Psest_0731 0.11 +0.2 800,829 - Psest_0731 0.11 -0.2 800,870 + Psest_0731 0.15 -0.3 800,871 - Psest_0731 0.15 -0.1 800,871 - Psest_0731 0.15 +0.9 800,871 - Psest_0731 0.15 +0.4 800,871 - Psest_0731 0.15 -0.7 800,912 + Psest_0731 0.20 +0.9 800,938 + Psest_0731 0.23 -0.2 800,939 - Psest_0731 0.23 -0.2 800,939 - Psest_0731 0.23 +1.2 801,240 + Psest_0731 0.57 -0.5 801,240 + Psest_0731 0.57 +0.7 801,368 + Psest_0731 0.71 -0.5 801,369 - Psest_0731 0.71 +0.1 801,689 + +1.7 801,690 - -0.1 801,856 + +2.4 801,856 + -0.7 801,857 - +0.0 801,857 - -0.3 801,857 - +0.4 801,857 - -1.0 801,857 - +0.1 801,857 - +0.0 801,857 - +1.1 801,857 - -0.3 802,120 + Psest_0732 0.23 -0.2 802,121 - Psest_0732 0.23 -0.4 802,121 - Psest_0732 0.23 +0.8 802,121 - Psest_0732 0.23 +0.1
Or see this region's nucleotide sequence