Experiment: m.b. Cholin acetate 153.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_451 and HP15_452 overlap by 1 nucleotides HP15_452 and HP15_453 are separated by 264 nucleotides HP15_453 and HP15_454 are separated by 61 nucleotides HP15_454 and HP15_455 overlap by 1 nucleotides
HP15_451: HP15_451 - type I secretion outer membrane protein, TolC family, at 455,798 to 457,180
_451
HP15_452: HP15_452 - hypothetical protein, at 457,180 to 457,290
_452
HP15_453: HP15_453 - thiamine biosynthesis protein thiC, at 457,555 to 459,450
_453
HP15_454: HP15_454 - nucleoside diphosphate pyrophosphatase, at 459,512 to 460,129
_454
HP15_455: HP15_455 - protein containing DUF1249, at 460,129 to 460,614
_455
Position (kb) 457
458
459
460 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 457.312 kb on + strand at 457.312 kb on + strand at 457.474 kb on + strand at 457.673 kb on + strand at 457.798 kb on + strand, within HP15_453 at 457.962 kb on - strand, within HP15_453 at 458.008 kb on + strand, within HP15_453 at 458.175 kb on - strand, within HP15_453 at 458.340 kb on + strand, within HP15_453 at 458.470 kb on + strand, within HP15_453 at 458.470 kb on + strand, within HP15_453 at 458.765 kb on - strand, within HP15_453 at 458.927 kb on + strand, within HP15_453 at 459.601 kb on - strand, within HP15_454 at 459.606 kb on - strand, within HP15_454 at 459.649 kb on - strand, within HP15_454 at 459.678 kb on + strand, within HP15_454 at 459.678 kb on + strand, within HP15_454 at 459.681 kb on + strand, within HP15_454 at 459.711 kb on + strand, within HP15_454 at 459.714 kb on - strand, within HP15_454 at 459.719 kb on - strand, within HP15_454 at 459.738 kb on - strand, within HP15_454 at 459.738 kb on - strand, within HP15_454 at 459.751 kb on - strand, within HP15_454 at 459.802 kb on - strand, within HP15_454 at 459.855 kb on - strand, within HP15_454 at 459.933 kb on - strand, within HP15_454 at 459.991 kb on + strand, within HP15_454 at 460.084 kb on - strand at 460.086 kb on + strand at 460.179 kb on + strand, within HP15_455 at 460.187 kb on - strand, within HP15_455
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM remove 457,312 + -2.8 457,312 + +0.5 457,474 + -0.1 457,673 + -2.5 457,798 + HP15_453 0.13 -3.1 457,962 - HP15_453 0.21 -1.3 458,008 + HP15_453 0.24 +0.6 458,175 - HP15_453 0.33 -2.1 458,340 + HP15_453 0.41 -1.3 458,470 + HP15_453 0.48 -0.6 458,470 + HP15_453 0.48 -2.1 458,765 - HP15_453 0.64 -1.4 458,927 + HP15_453 0.72 +0.4 459,601 - HP15_454 0.14 +0.1 459,606 - HP15_454 0.15 +1.1 459,649 - HP15_454 0.22 -0.1 459,678 + HP15_454 0.27 -0.3 459,678 + HP15_454 0.27 +0.1 459,681 + HP15_454 0.27 +0.6 459,711 + HP15_454 0.32 +0.9 459,714 - HP15_454 0.33 -0.1 459,719 - HP15_454 0.33 +0.7 459,738 - HP15_454 0.37 -0.0 459,738 - HP15_454 0.37 -0.2 459,751 - HP15_454 0.39 +0.0 459,802 - HP15_454 0.47 -0.4 459,855 - HP15_454 0.56 +1.2 459,933 - HP15_454 0.68 -0.2 459,991 + HP15_454 0.78 +1.5 460,084 - -1.0 460,086 + +0.2 460,179 + HP15_455 0.10 -0.4 460,187 - HP15_455 0.12 -1.4
Or see this region's nucleotide sequence