Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4005

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
4,176,952	+		Psest_4004	0.46	+0.2
4,176,953	-		Psest_4004	0.46	-0.7
4,177,063	+		Psest_4004	0.54	+1.7
4,177,691	-				+0.3
4,177,691	-				-0.6
4,177,691	-				+0.3
4,177,754	-				+0.1
4,178,053	+		Psest_4005	0.14	+2.6
4,178,110	+		Psest_4005	0.17	-0.5
4,178,111	-		Psest_4005	0.18	+1.1
4,178,290	+		Psest_4005	0.28	-1.9
4,178,291	-		Psest_4005	0.28	+0.2
4,178,543	-		Psest_4005	0.42	-0.3
4,178,875	+		Psest_4005	0.60	+0.6
4,178,875	+		Psest_4005	0.60	+0.1
4,178,875	+		Psest_4005	0.60	-0.9
4,178,876	-		Psest_4005	0.60	-1.4
4,178,876	-		Psest_4005	0.60	-1.8
4,178,876	-		Psest_4005	0.60	-0.8
4,179,154	-		Psest_4005	0.76	-0.4
4,179,184	+		Psest_4005	0.78	-0.3
4,179,184	+		Psest_4005	0.78	-0.1
4,179,184	+		Psest_4005	0.78	-0.7
4,179,184	+		Psest_4005	0.78	+0.3
4,179,534	+				-0.2
4,179,580	+				+0.5
4,179,580	+				-0.5
4,179,603	+				+2.0
4,179,603	+				+0.8
4,179,604	-				+0.5
4,179,604	-				+0.7
4,179,622	+				+0.6
4,179,623	-				-0.6
4,179,828	-				+0.8
4,179,888	+		Psest_4006	0.17	+1.2
4,179,989	+		Psest_4006	0.31	+0.7
4,179,989	+		Psest_4006	0.31	+1.2
4,179,989	+		Psest_4006	0.31	+0.0
4,179,990	-		Psest_4006	0.31	+0.3
4,180,089	-		Psest_4006	0.45	+1.0
4,180,089	-		Psest_4006	0.45	+1.4
4,180,231	+		Psest_4006	0.65	+1.0
4,180,231	+		Psest_4006	0.65	+1.9
4,180,231	+		Psest_4006	0.65	+2.0
4,180,232	-		Psest_4006	0.65	+2.4
4,180,232	-		Psest_4006	0.65	+0.4
4,180,232	-		Psest_4006	0.65	+0.3
4,180,400	+		Psest_4006	0.88	+1.6
4,180,401	-		Psest_4006	0.89	+0.1
4,180,401	-		Psest_4006	0.89	+0.7
4,180,401	-		Psest_4006	0.89	-1.5
4,180,401	-		Psest_4006	0.89	+0.4
4,180,537	+				+0.9
4,180,537	+				+0.4
4,180,538	-				-0.1
4,180,538	-				+0.6
4,180,539	+				+0.7
4,180,539	+				+0.2
4,180,540	-				+1.5
4,180,540	-				+1.6
4,180,540	-				+0.8
4,180,540	-				-0.8
4,180,540	-				-1.3
4,180,540	-				+0.4