Experiment: m.b. Cholin acetate 153.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3487 and HP15_3488 are separated by 190 nucleotides HP15_3488 and HP15_3489 overlap by 11 nucleotides HP15_3489 and HP15_3490 are separated by 29 nucleotides
HP15_3487: HP15_3487 - RNA polymerase, sigma 32 subunit, RpoH, at 3,672,226 to 3,673,086
_3487
HP15_3488: HP15_3488 - cell division protein FtsX-like protein, at 3,673,277 to 3,674,284
_3488
HP15_3489: HP15_3489 - cell division ATP-binding protein FtsE, at 3,674,274 to 3,674,966
_3489
HP15_3490: HP15_3490 - signal recognition particle-docking protein FtsY, at 3,674,996 to 3,676,189
_3490
Position (kb)
3673
3674
3675 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3673.088 kb on + strand at 3673.342 kb on + strand at 3673.350 kb on - strand at 3673.455 kb on - strand, within HP15_3488 at 3673.545 kb on - strand, within HP15_3488 at 3673.626 kb on + strand, within HP15_3488 at 3673.675 kb on + strand, within HP15_3488 at 3673.678 kb on + strand, within HP15_3488 at 3673.727 kb on + strand, within HP15_3488 at 3673.727 kb on + strand, within HP15_3488 at 3673.740 kb on - strand, within HP15_3488 at 3673.742 kb on + strand, within HP15_3488 at 3673.836 kb on + strand, within HP15_3488 at 3673.836 kb on + strand, within HP15_3488 at 3673.873 kb on - strand, within HP15_3488 at 3673.930 kb on + strand, within HP15_3488 at 3673.946 kb on - strand, within HP15_3488 at 3673.983 kb on - strand, within HP15_3488 at 3674.036 kb on + strand, within HP15_3488 at 3674.104 kb on - strand, within HP15_3488 at 3674.108 kb on + strand, within HP15_3488 at 3674.379 kb on + strand, within HP15_3489 at 3674.381 kb on + strand, within HP15_3489 at 3674.387 kb on - strand, within HP15_3489 at 3674.434 kb on + strand, within HP15_3489 at 3674.458 kb on + strand, within HP15_3489 at 3674.543 kb on - strand, within HP15_3489 at 3674.556 kb on - strand, within HP15_3489 at 3674.606 kb on - strand, within HP15_3489 at 3674.606 kb on - strand, within HP15_3489 at 3674.643 kb on + strand, within HP15_3489 at 3674.673 kb on + strand, within HP15_3489 at 3674.673 kb on + strand, within HP15_3489 at 3674.673 kb on + strand, within HP15_3489 at 3674.681 kb on - strand, within HP15_3489 at 3674.681 kb on - strand, within HP15_3489 at 3674.704 kb on - strand, within HP15_3489 at 3674.707 kb on - strand, within HP15_3489 at 3674.821 kb on - strand, within HP15_3489 at 3674.917 kb on - strand at 3674.919 kb on + strand at 3674.962 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM remove 3,673,088 + -2.1 3,673,342 + -1.7 3,673,350 - -1.7 3,673,455 - HP15_3488 0.18 -1.9 3,673,545 - HP15_3488 0.27 -2.7 3,673,626 + HP15_3488 0.35 -2.6 3,673,675 + HP15_3488 0.39 -0.7 3,673,678 + HP15_3488 0.40 -1.7 3,673,727 + HP15_3488 0.45 +0.3 3,673,727 + HP15_3488 0.45 -4.2 3,673,740 - HP15_3488 0.46 -1.3 3,673,742 + HP15_3488 0.46 -3.6 3,673,836 + HP15_3488 0.55 -1.5 3,673,836 + HP15_3488 0.55 -1.2 3,673,873 - HP15_3488 0.59 -2.5 3,673,930 + HP15_3488 0.65 -2.3 3,673,946 - HP15_3488 0.66 -2.3 3,673,983 - HP15_3488 0.70 -1.5 3,674,036 + HP15_3488 0.75 -1.6 3,674,104 - HP15_3488 0.82 -3.4 3,674,108 + HP15_3488 0.82 -1.8 3,674,379 + HP15_3489 0.15 -1.0 3,674,381 + HP15_3489 0.15 -2.3 3,674,387 - HP15_3489 0.16 -1.4 3,674,434 + HP15_3489 0.23 -1.2 3,674,458 + HP15_3489 0.27 -2.9 3,674,543 - HP15_3489 0.39 +0.9 3,674,556 - HP15_3489 0.41 -0.3 3,674,606 - HP15_3489 0.48 -1.1 3,674,606 - HP15_3489 0.48 -1.1 3,674,643 + HP15_3489 0.53 -1.1 3,674,673 + HP15_3489 0.58 -2.4 3,674,673 + HP15_3489 0.58 -3.5 3,674,673 + HP15_3489 0.58 -2.4 3,674,681 - HP15_3489 0.59 -0.7 3,674,681 - HP15_3489 0.59 -0.4 3,674,704 - HP15_3489 0.62 -1.3 3,674,707 - HP15_3489 0.62 -0.7 3,674,821 - HP15_3489 0.79 -1.7 3,674,917 - -2.6 3,674,919 + +1.8 3,674,962 + -0.4
Or see this region's nucleotide sequence