Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3140 and Psest_3141 are separated by 108 nucleotides Psest_3141 and Psest_3142 are separated by 58 nucleotides Psest_3142 and Psest_3143 are separated by 51 nucleotides Psest_3143 and Psest_3144 are separated by 91 nucleotides
Psest_3140: Psest_3140 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 3,314,766 to 3,315,491
_3140
Psest_3141: Psest_3141 - ADP-ribose pyrophosphatase, at 3,315,600 to 3,316,163
_3141
Psest_3142: Psest_3142 - Uncharacterized protein conserved in bacteria, at 3,316,222 to 3,316,725
_3142
Psest_3143: Psest_3143 - Uncharacterized protein conserved in bacteria, at 3,316,777 to 3,317,094
_3143
Psest_3144: Psest_3144 - Phage integrase family., at 3,317,186 to 3,318,724
_3144
Position (kb)
3316
3317 Strain fitness (log2 ratio)
-1
0
1 at 3315.350 kb on - strand, within Psest_3140 at 3315.369 kb on + strand, within Psest_3140 at 3315.369 kb on + strand, within Psest_3140 at 3315.370 kb on - strand, within Psest_3140 at 3315.370 kb on - strand, within Psest_3140 at 3315.452 kb on - strand at 3315.538 kb on - strand at 3315.607 kb on - strand at 3315.897 kb on + strand, within Psest_3141 at 3315.897 kb on + strand, within Psest_3141 at 3315.897 kb on + strand, within Psest_3141 at 3315.897 kb on + strand, within Psest_3141 at 3315.898 kb on - strand, within Psest_3141 at 3315.898 kb on - strand, within Psest_3141 at 3315.898 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.900 kb on - strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.933 kb on + strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3315.934 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.064 kb on - strand, within Psest_3141 at 3316.257 kb on + strand at 3316.257 kb on + strand at 3316.258 kb on - strand at 3316.287 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.453 kb on + strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.454 kb on - strand, within Psest_3142 at 3316.482 kb on + strand, within Psest_3142 at 3316.482 kb on + strand, within Psest_3142 at 3316.483 kb on - strand, within Psest_3142 at 3316.483 kb on - strand, within Psest_3142 at 3316.483 kb on - strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.486 kb on + strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.487 kb on - strand, within Psest_3142 at 3316.679 kb on + strand at 3316.679 kb on + strand at 3316.680 kb on - strand at 3316.680 kb on - strand at 3316.811 kb on + strand, within Psest_3143 at 3316.812 kb on - strand, within Psest_3143 at 3316.812 kb on - strand, within Psest_3143 at 3316.812 kb on - strand, within Psest_3143 at 3316.858 kb on - strand, within Psest_3143 at 3316.906 kb on + strand, within Psest_3143 at 3316.907 kb on - strand, within Psest_3143 at 3316.936 kb on - strand, within Psest_3143 at 3316.978 kb on + strand, within Psest_3143 at 3317.011 kb on + strand, within Psest_3143 at 3317.159 kb on + strand at 3317.246 kb on + strand at 3317.247 kb on - strand at 3317.247 kb on - strand at 3317.464 kb on - strand, within Psest_3144 at 3317.464 kb on - strand, within Psest_3144 at 3317.464 kb on - strand, within Psest_3144 at 3317.470 kb on + strand, within Psest_3144 at 3317.557 kb on - strand, within Psest_3144
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 3,315,350 - Psest_3140 0.80 -1.2 3,315,369 + Psest_3140 0.83 -0.2 3,315,369 + Psest_3140 0.83 -0.7 3,315,370 - Psest_3140 0.83 -0.9 3,315,370 - Psest_3140 0.83 +0.5 3,315,452 - +0.7 3,315,538 - -0.3 3,315,607 - +0.8 3,315,897 + Psest_3141 0.53 -0.8 3,315,897 + Psest_3141 0.53 +0.0 3,315,897 + Psest_3141 0.53 -0.1 3,315,897 + Psest_3141 0.53 -0.4 3,315,898 - Psest_3141 0.53 -0.1 3,315,898 - Psest_3141 0.53 +0.3 3,315,898 - Psest_3141 0.53 +0.2 3,315,900 - Psest_3141 0.53 +0.4 3,315,900 - Psest_3141 0.53 +0.4 3,315,900 - Psest_3141 0.53 +0.4 3,315,900 - Psest_3141 0.53 +0.6 3,315,933 + Psest_3141 0.59 -1.4 3,315,933 + Psest_3141 0.59 -0.3 3,315,933 + Psest_3141 0.59 -0.1 3,315,933 + Psest_3141 0.59 +0.0 3,315,933 + Psest_3141 0.59 -0.4 3,315,933 + Psest_3141 0.59 +0.2 3,315,933 + Psest_3141 0.59 -0.3 3,315,933 + Psest_3141 0.59 -1.2 3,315,933 + Psest_3141 0.59 +0.4 3,315,933 + Psest_3141 0.59 -0.2 3,315,933 + Psest_3141 0.59 -0.7 3,315,933 + Psest_3141 0.59 +0.0 3,315,933 + Psest_3141 0.59 -0.5 3,315,933 + Psest_3141 0.59 -0.4 3,315,933 + Psest_3141 0.59 +0.3 3,315,933 + Psest_3141 0.59 -0.4 3,315,933 + Psest_3141 0.59 +0.4 3,315,933 + Psest_3141 0.59 -0.2 3,315,933 + Psest_3141 0.59 +0.6 3,315,934 - Psest_3141 0.59 +0.2 3,315,934 - Psest_3141 0.59 -0.3 3,315,934 - Psest_3141 0.59 +0.1 3,315,934 - Psest_3141 0.59 +0.3 3,315,934 - Psest_3141 0.59 -0.4 3,315,934 - Psest_3141 0.59 +0.1 3,315,934 - Psest_3141 0.59 +0.5 3,315,934 - Psest_3141 0.59 +0.1 3,315,934 - Psest_3141 0.59 -0.1 3,315,934 - Psest_3141 0.59 -0.5 3,315,934 - Psest_3141 0.59 -0.4 3,315,934 - Psest_3141 0.59 +0.1 3,315,934 - Psest_3141 0.59 +0.6 3,315,934 - Psest_3141 0.59 -0.4 3,315,934 - Psest_3141 0.59 +0.2 3,315,934 - Psest_3141 0.59 +0.7 3,315,934 - Psest_3141 0.59 +0.7 3,315,934 - Psest_3141 0.59 -0.7 3,316,064 - Psest_3141 0.82 +0.1 3,316,064 - Psest_3141 0.82 -0.4 3,316,064 - Psest_3141 0.82 -0.9 3,316,064 - Psest_3141 0.82 +1.7 3,316,064 - Psest_3141 0.82 +0.6 3,316,064 - Psest_3141 0.82 +0.7 3,316,064 - Psest_3141 0.82 +0.6 3,316,257 + +0.5 3,316,257 + +0.5 3,316,258 - +0.1 3,316,287 + Psest_3142 0.13 +0.4 3,316,453 + Psest_3142 0.46 +0.4 3,316,453 + Psest_3142 0.46 +1.0 3,316,453 + Psest_3142 0.46 +0.5 3,316,453 + Psest_3142 0.46 +0.4 3,316,453 + Psest_3142 0.46 +0.8 3,316,453 + Psest_3142 0.46 +1.1 3,316,453 + Psest_3142 0.46 +1.6 3,316,454 - Psest_3142 0.46 +0.3 3,316,454 - Psest_3142 0.46 +0.3 3,316,454 - Psest_3142 0.46 +0.4 3,316,454 - Psest_3142 0.46 +0.6 3,316,482 + Psest_3142 0.52 +0.6 3,316,482 + Psest_3142 0.52 +0.1 3,316,483 - Psest_3142 0.52 +0.7 3,316,483 - Psest_3142 0.52 +0.2 3,316,483 - Psest_3142 0.52 +0.8 3,316,486 + Psest_3142 0.52 +0.4 3,316,486 + Psest_3142 0.52 +0.5 3,316,486 + Psest_3142 0.52 +0.7 3,316,486 + Psest_3142 0.52 +0.4 3,316,486 + Psest_3142 0.52 +1.1 3,316,486 + Psest_3142 0.52 +0.5 3,316,486 + Psest_3142 0.52 +0.3 3,316,486 + Psest_3142 0.52 +0.2 3,316,486 + Psest_3142 0.52 +1.2 3,316,486 + Psest_3142 0.52 +0.9 3,316,486 + Psest_3142 0.52 +0.3 3,316,486 + Psest_3142 0.52 +0.8 3,316,486 + Psest_3142 0.52 +0.9 3,316,487 - Psest_3142 0.53 +0.5 3,316,487 - Psest_3142 0.53 +0.7 3,316,487 - Psest_3142 0.53 +1.0 3,316,487 - Psest_3142 0.53 +0.1 3,316,487 - Psest_3142 0.53 +0.5 3,316,487 - Psest_3142 0.53 +0.0 3,316,487 - Psest_3142 0.53 +0.5 3,316,487 - Psest_3142 0.53 +0.8 3,316,679 + +0.9 3,316,679 + +1.0 3,316,680 - +0.5 3,316,680 - +0.6 3,316,811 + Psest_3143 0.11 -0.7 3,316,812 - Psest_3143 0.11 +1.3 3,316,812 - Psest_3143 0.11 +0.2 3,316,812 - Psest_3143 0.11 +0.5 3,316,858 - Psest_3143 0.25 +0.3 3,316,906 + Psest_3143 0.41 -0.2 3,316,907 - Psest_3143 0.41 +0.6 3,316,936 - Psest_3143 0.50 +0.5 3,316,978 + Psest_3143 0.63 -0.2 3,317,011 + Psest_3143 0.74 -0.2 3,317,159 + -0.4 3,317,246 + -0.2 3,317,247 - +0.6 3,317,247 - -0.9 3,317,464 - Psest_3144 0.18 +0.0 3,317,464 - Psest_3144 0.18 +0.1 3,317,464 - Psest_3144 0.18 -0.2 3,317,470 + Psest_3144 0.18 -0.1 3,317,557 - Psest_3144 0.24 -0.6
Or see this region's nucleotide sequence