Experiment: m.b. Cholin acetate 153.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2897 and HP15_2898 overlap by 4 nucleotides HP15_2898 and HP15_2899 are separated by 21 nucleotides HP15_2899 and HP15_2900 are separated by 132 nucleotides HP15_2900 and HP15_2901 are separated by 126 nucleotides
HP15_2897: HP15_2897 - uncharacterized conserved protein UCP037004, at 3,033,887 to 3,034,834
_2897
HP15_2898: HP15_2898 - secreted protein containing DUF481, at 3,034,831 to 3,035,562
_2898
HP15_2899: HP15_2899 - rhodanese sulfurtransferase, at 3,035,584 to 3,036,606
_2899
HP15_2900: HP15_2900 - DSBA oxidoreductase, at 3,036,739 to 3,037,470
_2900
HP15_2901: HP15_2901 - 2-nitropropane dioxygenase NPD, at 3,037,597 to 3,038,571
_2901
Position (kb)
3035
3036
3037 Strain fitness (log2 ratio)
-2
-1
0
1 at 3034.599 kb on + strand, within HP15_2897 at 3034.643 kb on - strand, within HP15_2897 at 3034.670 kb on + strand, within HP15_2897 at 3034.838 kb on + strand at 3034.909 kb on + strand, within HP15_2898 at 3034.972 kb on - strand, within HP15_2898 at 3035.103 kb on - strand, within HP15_2898 at 3035.404 kb on + strand, within HP15_2898 at 3035.551 kb on + strand at 3035.582 kb on + strand at 3035.600 kb on + strand at 3035.637 kb on + strand at 3035.814 kb on + strand, within HP15_2899 at 3035.872 kb on - strand, within HP15_2899 at 3036.001 kb on + strand, within HP15_2899 at 3036.001 kb on - strand, within HP15_2899 at 3036.020 kb on - strand, within HP15_2899 at 3036.027 kb on - strand, within HP15_2899 at 3036.068 kb on + strand, within HP15_2899 at 3036.086 kb on + strand, within HP15_2899 at 3036.110 kb on - strand, within HP15_2899 at 3036.135 kb on + strand, within HP15_2899 at 3036.282 kb on + strand, within HP15_2899 at 3036.293 kb on + strand, within HP15_2899 at 3036.306 kb on - strand, within HP15_2899 at 3036.568 kb on + strand at 3036.568 kb on + strand at 3036.568 kb on + strand at 3036.576 kb on - strand at 3036.643 kb on + strand at 3036.727 kb on + strand at 3036.884 kb on + strand, within HP15_2900 at 3037.139 kb on + strand, within HP15_2900 at 3037.159 kb on - strand, within HP15_2900 at 3037.561 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM remove 3,034,599 + HP15_2897 0.75 -1.5 3,034,643 - HP15_2897 0.80 +0.1 3,034,670 + HP15_2897 0.83 -0.2 3,034,838 + +0.3 3,034,909 + HP15_2898 0.11 -0.2 3,034,972 - HP15_2898 0.19 -0.6 3,035,103 - HP15_2898 0.37 -0.4 3,035,404 + HP15_2898 0.78 -0.1 3,035,551 + +0.1 3,035,582 + -1.4 3,035,600 + +0.6 3,035,637 + -2.0 3,035,814 + HP15_2899 0.22 -0.5 3,035,872 - HP15_2899 0.28 -0.3 3,036,001 + HP15_2899 0.41 -1.1 3,036,001 - HP15_2899 0.41 -1.3 3,036,020 - HP15_2899 0.43 -0.7 3,036,027 - HP15_2899 0.43 -0.1 3,036,068 + HP15_2899 0.47 -1.5 3,036,086 + HP15_2899 0.49 -0.1 3,036,110 - HP15_2899 0.51 -0.5 3,036,135 + HP15_2899 0.54 -0.9 3,036,282 + HP15_2899 0.68 -2.1 3,036,293 + HP15_2899 0.69 -0.5 3,036,306 - HP15_2899 0.71 -2.4 3,036,568 + +0.1 3,036,568 + -0.9 3,036,568 + +0.7 3,036,576 - -1.8 3,036,643 + +0.0 3,036,727 + +1.7 3,036,884 + HP15_2900 0.20 +0.1 3,037,139 + HP15_2900 0.55 +0.8 3,037,159 - HP15_2900 0.57 +0.1 3,037,561 - +0.2
Or see this region's nucleotide sequence