Strain Fitness in Marinobacter adhaerens HP15 around HP15_2899

Experiment: m.b. Cholin acetate 153.15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2897 and HP15_2898 overlap by 4 nucleotidesHP15_2898 and HP15_2899 are separated by 21 nucleotidesHP15_2899 and HP15_2900 are separated by 132 nucleotidesHP15_2900 and HP15_2901 are separated by 126 nucleotides HP15_2897: HP15_2897 - uncharacterized conserved protein UCP037004, at 3,033,887 to 3,034,834 _2897 HP15_2898: HP15_2898 - secreted protein containing DUF481, at 3,034,831 to 3,035,562 _2898 HP15_2899: HP15_2899 - rhodanese sulfurtransferase, at 3,035,584 to 3,036,606 _2899 HP15_2900: HP15_2900 - DSBA oxidoreductase, at 3,036,739 to 3,037,470 _2900 HP15_2901: HP15_2901 - 2-nitropropane dioxygenase NPD, at 3,037,597 to 3,038,571 _2901 Position (kb) 3035 3036 3037Strain fitness (log2 ratio) -2 -1 0 1at 3034.599 kb on + strand, within HP15_2897at 3034.643 kb on - strand, within HP15_2897at 3034.670 kb on + strand, within HP15_2897at 3034.838 kb on + strandat 3034.909 kb on + strand, within HP15_2898at 3034.972 kb on - strand, within HP15_2898at 3035.103 kb on - strand, within HP15_2898at 3035.404 kb on + strand, within HP15_2898at 3035.551 kb on + strandat 3035.582 kb on + strandat 3035.600 kb on + strandat 3035.637 kb on + strandat 3035.814 kb on + strand, within HP15_2899at 3035.872 kb on - strand, within HP15_2899at 3036.001 kb on + strand, within HP15_2899at 3036.001 kb on - strand, within HP15_2899at 3036.020 kb on - strand, within HP15_2899at 3036.027 kb on - strand, within HP15_2899at 3036.068 kb on + strand, within HP15_2899at 3036.086 kb on + strand, within HP15_2899at 3036.110 kb on - strand, within HP15_2899at 3036.135 kb on + strand, within HP15_2899at 3036.282 kb on + strand, within HP15_2899at 3036.293 kb on + strand, within HP15_2899at 3036.306 kb on - strand, within HP15_2899at 3036.568 kb on + strandat 3036.568 kb on + strandat 3036.568 kb on + strandat 3036.576 kb on - strandat 3036.643 kb on + strandat 3036.727 kb on + strandat 3036.884 kb on + strand, within HP15_2900at 3037.139 kb on + strand, within HP15_2900at 3037.159 kb on - strand, within HP15_2900at 3037.561 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM
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3,034,599 + HP15_2897 0.75 -1.5
3,034,643 - HP15_2897 0.80 +0.1
3,034,670 + HP15_2897 0.83 -0.2
3,034,838 + +0.3
3,034,909 + HP15_2898 0.11 -0.2
3,034,972 - HP15_2898 0.19 -0.6
3,035,103 - HP15_2898 0.37 -0.4
3,035,404 + HP15_2898 0.78 -0.1
3,035,551 + +0.1
3,035,582 + -1.4
3,035,600 + +0.6
3,035,637 + -2.0
3,035,814 + HP15_2899 0.22 -0.5
3,035,872 - HP15_2899 0.28 -0.3
3,036,001 + HP15_2899 0.41 -1.1
3,036,001 - HP15_2899 0.41 -1.3
3,036,020 - HP15_2899 0.43 -0.7
3,036,027 - HP15_2899 0.43 -0.1
3,036,068 + HP15_2899 0.47 -1.5
3,036,086 + HP15_2899 0.49 -0.1
3,036,110 - HP15_2899 0.51 -0.5
3,036,135 + HP15_2899 0.54 -0.9
3,036,282 + HP15_2899 0.68 -2.1
3,036,293 + HP15_2899 0.69 -0.5
3,036,306 - HP15_2899 0.71 -2.4
3,036,568 + +0.1
3,036,568 + -0.9
3,036,568 + +0.7
3,036,576 - -1.8
3,036,643 + +0.0
3,036,727 + +1.7
3,036,884 + HP15_2900 0.20 +0.1
3,037,139 + HP15_2900 0.55 +0.8
3,037,159 - HP15_2900 0.57 +0.1
3,037,561 - +0.2

Or see this region's nucleotide sequence