Strain Fitness in Marinobacter adhaerens HP15 around HP15_2491

Experiment: m.b. Cholin acetate 153.15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2490 and HP15_2491 are separated by 34 nucleotidesHP15_2491 and HP15_2492 overlap by 8 nucleotidesHP15_2492 and HP15_2493 overlap by 4 nucleotides HP15_2490: HP15_2490 - kinase, at 2,629,777 to 2,630,793 _2490 HP15_2491: HP15_2491 - kinase, at 2,630,828 to 2,631,196 _2491 HP15_2492: HP15_2492 - methyltransferase, at 2,631,189 to 2,631,965 _2492 HP15_2493: HP15_2493 - methyltransferase, at 2,631,962 to 2,632,960 _2493 Position (kb) 2630 2631 2632Strain fitness (log2 ratio) -2 -1 0 1 2at 2629.899 kb on - strand, within HP15_2490at 2629.928 kb on + strand, within HP15_2490at 2630.033 kb on - strand, within HP15_2490at 2630.075 kb on - strand, within HP15_2490at 2630.086 kb on - strand, within HP15_2490at 2630.149 kb on - strand, within HP15_2490at 2630.153 kb on + strand, within HP15_2490at 2630.180 kb on + strand, within HP15_2490at 2630.180 kb on + strand, within HP15_2490at 2630.312 kb on - strand, within HP15_2490at 2630.314 kb on + strand, within HP15_2490at 2630.314 kb on + strand, within HP15_2490at 2630.314 kb on + strand, within HP15_2490at 2630.322 kb on - strand, within HP15_2490at 2630.322 kb on - strand, within HP15_2490at 2630.322 kb on - strand, within HP15_2490at 2630.351 kb on + strand, within HP15_2490at 2630.709 kb on + strandat 2630.709 kb on + strandat 2630.745 kb on + strandat 2630.853 kb on - strandat 2631.026 kb on + strand, within HP15_2491at 2631.079 kb on - strand, within HP15_2491at 2631.225 kb on - strandat 2631.242 kb on + strandat 2631.348 kb on - strand, within HP15_2492at 2631.397 kb on + strand, within HP15_2492at 2631.402 kb on + strand, within HP15_2492at 2631.402 kb on + strand, within HP15_2492at 2631.410 kb on - strand, within HP15_2492at 2631.410 kb on - strand, within HP15_2492at 2631.410 kb on - strand, within HP15_2492at 2631.410 kb on - strand, within HP15_2492at 2631.595 kb on - strand, within HP15_2492at 2631.654 kb on - strand, within HP15_2492at 2631.691 kb on - strand, within HP15_2492at 2631.691 kb on - strand, within HP15_2492at 2631.701 kb on - strand, within HP15_2492at 2631.845 kb on + strand, within HP15_2492at 2632.039 kb on - strandat 2632.054 kb on - strandat 2632.137 kb on + strand, within HP15_2493at 2632.185 kb on + strand, within HP15_2493at 2632.195 kb on + strand, within HP15_2493

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM
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2,629,899 - HP15_2490 0.12 -0.9
2,629,928 + HP15_2490 0.15 -0.6
2,630,033 - HP15_2490 0.25 -1.5
2,630,075 - HP15_2490 0.29 +1.1
2,630,086 - HP15_2490 0.30 -1.6
2,630,149 - HP15_2490 0.37 +0.8
2,630,153 + HP15_2490 0.37 -0.5
2,630,180 + HP15_2490 0.40 -0.8
2,630,180 + HP15_2490 0.40 +0.0
2,630,312 - HP15_2490 0.53 -0.5
2,630,314 + HP15_2490 0.53 +0.2
2,630,314 + HP15_2490 0.53 +0.1
2,630,314 + HP15_2490 0.53 -0.1
2,630,322 - HP15_2490 0.54 +0.6
2,630,322 - HP15_2490 0.54 -0.3
2,630,322 - HP15_2490 0.54 -0.7
2,630,351 + HP15_2490 0.56 -1.7
2,630,709 + +0.9
2,630,709 + +0.5
2,630,745 + -0.9
2,630,853 - -0.6
2,631,026 + HP15_2491 0.54 -1.7
2,631,079 - HP15_2491 0.68 -1.9
2,631,225 - +1.1
2,631,242 + +0.3
2,631,348 - HP15_2492 0.20 +0.0
2,631,397 + HP15_2492 0.27 -0.5
2,631,402 + HP15_2492 0.27 -0.6
2,631,402 + HP15_2492 0.27 -1.0
2,631,410 - HP15_2492 0.28 +0.3
2,631,410 - HP15_2492 0.28 +1.9
2,631,410 - HP15_2492 0.28 -2.3
2,631,410 - HP15_2492 0.28 -0.9
2,631,595 - HP15_2492 0.52 -1.2
2,631,654 - HP15_2492 0.60 -0.6
2,631,691 - HP15_2492 0.65 +0.2
2,631,691 - HP15_2492 0.65 -0.8
2,631,701 - HP15_2492 0.66 +0.1
2,631,845 + HP15_2492 0.84 -0.6
2,632,039 - +0.5
2,632,054 - -1.7
2,632,137 + HP15_2493 0.18 -0.4
2,632,185 + HP15_2493 0.22 +0.1
2,632,195 + HP15_2493 0.23 +0.7

Or see this region's nucleotide sequence