Strain Fitness in Marinobacter adhaerens HP15 around HP15_1774

Experiment: m.b. Cholin acetate 153.15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1773 and HP15_1774 overlap by 4 nucleotidesHP15_1774 and HP15_1775 are separated by 23 nucleotidesHP15_1775 and HP15_1776 are separated by 81 nucleotides HP15_1773: HP15_1773 - cyclopropane-fatty-acyl-phospholipid synthase, at 1,870,279 to 1,871,553 _1773 HP15_1774: HP15_1774 - conserved hypothetical protein, membrane, at 1,871,550 to 1,872,071 _1774 HP15_1775: HP15_1775 - conserved hypothetical protein, at 1,872,095 to 1,872,808 _1775 HP15_1776: HP15_1776 - exonuclease III, at 1,872,890 to 1,873,702 _1776 Position (kb) 1871 1872 1873Strain fitness (log2 ratio) -2 -1 0 1 2at 1870.640 kb on - strand, within HP15_1773at 1870.652 kb on - strand, within HP15_1773at 1870.663 kb on + strand, within HP15_1773at 1870.743 kb on + strand, within HP15_1773at 1870.743 kb on + strand, within HP15_1773at 1870.794 kb on - strand, within HP15_1773at 1870.937 kb on + strand, within HP15_1773at 1871.026 kb on + strand, within HP15_1773at 1871.042 kb on - strand, within HP15_1773at 1871.042 kb on - strand, within HP15_1773at 1871.136 kb on + strand, within HP15_1773at 1871.148 kb on + strand, within HP15_1773at 1871.148 kb on + strand, within HP15_1773at 1871.156 kb on - strand, within HP15_1773at 1871.156 kb on - strand, within HP15_1773at 1871.168 kb on + strand, within HP15_1773at 1871.172 kb on + strand, within HP15_1773at 1871.175 kb on - strand, within HP15_1773at 1871.258 kb on + strand, within HP15_1773at 1871.484 kb on + strandat 1871.530 kb on + strandat 1871.806 kb on - strand, within HP15_1774at 1872.006 kb on - strand, within HP15_1774at 1872.221 kb on + strand, within HP15_1775at 1872.378 kb on - strand, within HP15_1775at 1872.620 kb on + strand, within HP15_1775at 1872.698 kb on - strand, within HP15_1775

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 153.15 mM
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1,870,640 - HP15_1773 0.28 +0.2
1,870,652 - HP15_1773 0.29 +0.4
1,870,663 + HP15_1773 0.30 +0.5
1,870,743 + HP15_1773 0.36 -1.7
1,870,743 + HP15_1773 0.36 +1.8
1,870,794 - HP15_1773 0.40 -1.0
1,870,937 + HP15_1773 0.52 -0.1
1,871,026 + HP15_1773 0.59 -1.7
1,871,042 - HP15_1773 0.60 +0.2
1,871,042 - HP15_1773 0.60 +0.2
1,871,136 + HP15_1773 0.67 +0.8
1,871,148 + HP15_1773 0.68 +0.4
1,871,148 + HP15_1773 0.68 -0.1
1,871,156 - HP15_1773 0.69 -1.0
1,871,156 - HP15_1773 0.69 -0.1
1,871,168 + HP15_1773 0.70 -0.6
1,871,172 + HP15_1773 0.70 +0.3
1,871,175 - HP15_1773 0.70 +0.0
1,871,258 + HP15_1773 0.77 -0.6
1,871,484 + -1.2
1,871,530 + +0.9
1,871,806 - HP15_1774 0.49 -1.8
1,872,006 - HP15_1774 0.87 +0.3
1,872,221 + HP15_1775 0.18 -1.6
1,872,378 - HP15_1775 0.40 +0.4
1,872,620 + HP15_1775 0.74 +0.4
1,872,698 - HP15_1775 0.84 +0.7

Or see this region's nucleotide sequence