Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3919

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
4,085,986	-				-0.3
4,085,988	-				-1.9
4,086,076	+				+0.3
4,086,077	-				-0.0
4,086,077	-				-2.0
4,086,077	-				+1.3
4,086,137	+				+0.6
4,086,137	+				+0.8
4,086,138	-				+1.9
4,086,138	-				+1.3
4,086,143	+				+1.1
4,086,143	+				+0.7
4,086,143	+				-0.7
4,086,143	+				-2.3
4,086,143	+				+0.1
4,086,143	+				+1.8
4,086,143	+				-0.3
4,086,143	+				+2.3
4,086,144	-				-1.9
4,086,144	-				+0.0
4,086,144	-				+0.1
4,086,144	-				+1.5
4,086,144	-				+0.7
4,086,221	-				-0.7
4,086,221	-				-1.9
4,086,221	-				-2.9
4,086,264	-				-0.3
4,086,297	+				+2.1
4,086,297	+				-0.7
4,086,297	+				-1.0
4,086,298	-				-2.5
4,086,322	-				+2.2
4,086,334	+				-1.5
4,086,335	-				-0.3
4,086,374	-				+1.8
4,086,385	+				-2.0
4,086,413	-				+0.0
4,086,413	-				+1.0
4,086,413	-				-0.3
4,086,480	-		Psest_3918	0.20	+0.4
4,086,484	-		Psest_3918	0.22	+3.3
4,086,598	+		Psest_3918	0.55	+0.9
4,086,599	-		Psest_3918	0.55	+0.6
4,086,599	-		Psest_3918	0.55	+0.4
4,086,613	+		Psest_3918	0.60	-0.3
4,086,613	+		Psest_3918	0.60	+1.1
4,086,614	-		Psest_3918	0.60	+0.3
4,086,614	-		Psest_3918	0.60	-0.3
4,086,617	+		Psest_3918	0.61	-1.6
4,086,617	+		Psest_3918	0.61	-2.3
4,086,617	+		Psest_3918	0.61	+0.3
4,086,617	+		Psest_3918	0.61	+0.4
4,086,617	+		Psest_3918	0.61	+1.2
4,086,617	+		Psest_3918	0.61	-1.9
4,086,618	-		Psest_3918	0.61	+0.2
4,086,618	-		Psest_3918	0.61	+0.3
4,086,618	-		Psest_3918	0.61	-2.7
4,086,618	-		Psest_3918	0.61	-0.7
4,086,651	+		Psest_3918	0.71	+1.8
4,086,694	-		Psest_3918	0.83	-1.7
4,086,694	-		Psest_3918	0.83	+0.8
4,086,696	-		Psest_3918	0.84	+0.8
4,086,710	-		Psest_3918	0.88	+1.2
4,086,728	-				-1.7
4,086,787	+				-2.3
4,086,787	+				-2.5
4,086,787	+				+1.0
4,086,788	-				+0.7
4,086,793	+				+1.4
4,086,793	+				-1.5
4,086,793	+				-1.5
4,086,793	+				-1.5
4,086,793	+				-1.7
4,086,793	+				-0.3
4,086,794	-				+0.2
4,086,794	-				-0.8
4,086,875	-				-2.8
4,087,122	+		Psest_3919	0.15	-1.4
4,087,123	-		Psest_3919	0.15	+1.2
4,087,185	-		Psest_3919	0.22	+1.6
4,087,260	-		Psest_3919	0.30	+2.0
4,087,260	-		Psest_3919	0.30	-1.5
4,087,346	+		Psest_3919	0.40	-1.5
4,087,346	+		Psest_3919	0.40	+1.6
4,087,404	+		Psest_3919	0.46	-1.3
4,087,405	-		Psest_3919	0.46	-2.8
4,087,405	-		Psest_3919	0.46	+1.0
4,087,405	-		Psest_3919	0.46	-1.0
4,087,432	-		Psest_3919	0.49	-0.3
4,087,432	-		Psest_3919	0.49	-1.0
4,087,442	+		Psest_3919	0.50	+2.2
4,087,559	+		Psest_3919	0.63	+0.5
4,087,572	+		Psest_3919	0.65	-1.0
4,087,572	+		Psest_3919	0.65	+1.6
4,087,572	+		Psest_3919	0.65	+1.3
4,087,678	-		Psest_3919	0.76	+0.9
4,087,678	-		Psest_3919	0.76	+0.6
4,087,847	+				+2.4
4,087,896	-				+2.0
4,087,926	+				-0.3
4,087,957	-				-1.3
4,087,957	-				+0.2
4,087,990	+				-2.5
4,087,990	+				+0.6
4,088,162	+		Psest_3920	0.16	+1.7
4,088,162	+		Psest_3920	0.16	+0.8
4,088,162	+		Psest_3920	0.16	-2.1
4,088,163	-		Psest_3920	0.16	-0.7
4,088,163	-		Psest_3920	0.16	-0.3
4,088,163	-		Psest_3920	0.16	+1.9
4,088,178	-		Psest_3920	0.17	+1.7
4,088,231	+		Psest_3920	0.22	-3.1
4,088,232	-		Psest_3920	0.22	-1.4
4,088,232	-		Psest_3920	0.22	+1.4
4,088,286	-		Psest_3920	0.26	+0.7
4,088,286	-		Psest_3920	0.26	-1.3
4,088,286	-		Psest_3920	0.26	-0.3
4,088,286	-		Psest_3920	0.26	-2.0
4,088,342	+		Psest_3920	0.31	-1.5
4,088,342	+		Psest_3920	0.31	+3.2
4,088,342	+		Psest_3920	0.31	-0.3
4,088,342	+		Psest_3920	0.31	+1.3
4,088,342	+		Psest_3920	0.31	+1.3
4,088,342	+		Psest_3920	0.31	-1.1
4,088,343	-		Psest_3920	0.31	-2.7
4,088,343	-		Psest_3920	0.31	+2.5
4,088,343	-		Psest_3920	0.31	+0.6
4,088,432	+		Psest_3920	0.39	-1.0
4,088,600	+		Psest_3920	0.53	+0.1
4,088,601	-		Psest_3920	0.54	-0.3
4,088,601	-		Psest_3920	0.54	-0.5
4,088,601	-		Psest_3920	0.54	-0.3
4,088,612	+		Psest_3920	0.55	+1.3
4,088,612	+		Psest_3920	0.55	+0.1
4,088,612	+		Psest_3920	0.55	+1.0
4,088,656	+		Psest_3920	0.58	-1.7
4,088,657	-		Psest_3920	0.58	+2.4
4,088,657	-		Psest_3920	0.58	-0.8
4,088,657	-		Psest_3920	0.58	+0.1
4,088,658	+		Psest_3920	0.58	-1.5
4,088,658	+		Psest_3920	0.58	-1.7
4,088,658	+		Psest_3920	0.58	-2.1
4,088,658	+		Psest_3920	0.58	+0.9
4,088,658	+		Psest_3920	0.58	+0.6
4,088,658	+		Psest_3920	0.58	+0.3
4,088,658	+		Psest_3920	0.58	-3.5
4,088,659	-		Psest_3920	0.59	-2.1
4,088,659	-		Psest_3920	0.59	+1.6
4,088,659	-		Psest_3920	0.59	-1.0
4,088,744	+		Psest_3920	0.66	+0.9
4,088,801	+		Psest_3920	0.71	+2.0
4,088,801	+		Psest_3920	0.71	+1.2
4,088,822	+		Psest_3920	0.73	-1.3
4,088,823	-		Psest_3920	0.73	-0.3
4,088,823	-		Psest_3920	0.73	+1.0
4,088,823	-		Psest_3920	0.73	-3.0
4,088,846	+		Psest_3920	0.75	-0.7
4,088,888	+		Psest_3920	0.78	+0.6
4,088,888	+		Psest_3920	0.78	-0.1
4,088,889	-		Psest_3920	0.78	-1.7
4,088,889	-		Psest_3920	0.78	-3.2