Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3161

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
3,332,269	+				+2.6
3,332,406	+				+2.1
3,332,406	+				+0.8
3,332,406	+				+2.3
3,332,406	+				+1.6
3,332,406	+				+2.7
3,332,406	+				+2.5
3,332,407	-				+1.6
3,332,407	-				-3.3
3,332,407	-				+1.4
3,332,407	-				+1.7
3,332,407	-				-1.3
3,332,407	-				+2.5
3,332,407	-				+0.3
3,332,407	-				+2.1
3,332,407	-				+2.1
3,332,407	-				+1.8
3,332,407	-				+0.3
3,332,407	-				-1.5
3,332,411	+				+0.4
3,332,411	+				+2.0
3,332,686	+		Psest_3160	0.25	+1.7
3,333,259	+				-0.0
3,333,259	+				+0.4
3,333,259	+				-3.1
3,333,259	+				-1.0
3,333,259	+				-1.4
3,333,259	+				+1.4
3,333,259	+				-2.4
3,333,259	+				-0.8
3,333,259	+				+2.3
3,333,259	+				-0.5
3,333,259	+				+1.8
3,333,259	+				-2.8
3,333,259	+				+0.9
3,333,259	+				+0.7
3,333,259	+				+1.1
3,333,260	-				+1.2
3,333,260	-				+0.5
3,333,260	-				-0.7
3,333,260	-				-0.6
3,333,260	-				-0.5
3,333,260	-				+0.7
3,333,260	-				-2.4
3,333,260	-				-0.2
3,333,260	-				+2.6
3,333,260	-				-4.0
3,333,260	-				-3.1
3,333,260	-				-0.2
3,333,270	+				-0.6
3,333,270	+				-1.0
3,333,271	-				-3.8
3,333,271	-				-1.0
3,333,345	+				-2.6
3,333,345	+				+2.8
3,333,345	+				+2.1
3,333,345	+				-2.5
3,333,345	+				-0.7
3,333,346	-				-3.0
3,333,346	-				+2.1
3,333,366	+				+2.0
3,333,367	-				+1.5
3,333,367	-				+0.9
3,333,367	-				-0.4
3,333,382	+		Psest_3161	0.10	+1.7
3,333,383	-		Psest_3161	0.10	-1.1
3,333,383	-		Psest_3161	0.10	+1.5
3,333,383	-		Psest_3161	0.10	+1.1
3,333,540	-		Psest_3161	0.25	+2.4
3,333,585	+		Psest_3161	0.29	+0.5
3,333,586	-		Psest_3161	0.29	-2.4
3,333,586	-		Psest_3161	0.29	-2.3
3,333,586	-		Psest_3161	0.29	+1.4
3,333,636	+		Psest_3161	0.33	+3.6
3,333,636	+		Psest_3161	0.33	-1.8
3,333,636	+		Psest_3161	0.33	+2.4
3,333,636	+		Psest_3161	0.33	+0.5
3,333,637	-		Psest_3161	0.34	-2.4
3,333,637	-		Psest_3161	0.34	+2.1
3,333,637	-		Psest_3161	0.34	+1.0
3,333,637	-		Psest_3161	0.34	+3.4
3,333,637	-		Psest_3161	0.34	-1.8
3,333,637	-		Psest_3161	0.34	+1.7
3,334,104	+		Psest_3161	0.76	-0.9
3,334,105	-		Psest_3161	0.76	+1.0
3,334,105	-		Psest_3161	0.76	+0.0
3,334,242	+		Psest_3161	0.89	+1.0
3,334,243	-		Psest_3161	0.89	-2.6
3,334,243	-		Psest_3161	0.89	+1.0
3,334,243	-		Psest_3161	0.89	+0.9
3,334,354	+				+0.4
3,334,354	+				-1.8
3,334,354	+				+0.5
3,334,354	+				+0.3
3,334,355	-				+2.0
3,334,360	+				+2.6
3,334,360	+				+2.5
3,334,402	+				-0.4
3,334,402	+				+2.0
3,334,402	+				-0.4
3,334,403	-				+1.5
3,334,403	-				-2.9
3,334,403	-				-0.8
3,334,577	-		Psest_3162	0.17	-0.9
3,334,577	-		Psest_3162	0.17	-2.9
3,334,741	+		Psest_3162	0.31	-1.8
3,334,741	+		Psest_3162	0.31	+2.6
3,334,741	+		Psest_3162	0.31	-1.1
3,334,742	-		Psest_3162	0.31	+0.2
3,334,742	-		Psest_3162	0.31	-1.1
3,335,061	+		Psest_3162	0.58	+3.4
3,335,062	-		Psest_3162	0.58	-2.4
3,335,062	-		Psest_3162	0.58	+0.4
3,335,062	-		Psest_3162	0.58	-1.7
3,335,122	+		Psest_3162	0.63	-3.3
3,335,122	+		Psest_3162	0.63	+0.3
3,335,123	-		Psest_3162	0.63	-1.7
3,335,123	-		Psest_3162	0.63	-3.3
3,335,123	-		Psest_3162	0.63	-0.2
3,335,172	-		Psest_3162	0.68	-3.1
3,335,173	+		Psest_3162	0.68	+0.5
3,335,173	+		Psest_3162	0.68	+0.3
3,335,173	+		Psest_3162	0.68	-0.5
3,335,173	+		Psest_3162	0.68	-2.8
3,335,173	+		Psest_3162	0.68	+1.1
3,335,173	+		Psest_3162	0.68	+0.3
3,335,173	+		Psest_3162	0.68	+1.4
3,335,174	-		Psest_3162	0.68	+1.3
3,335,174	-		Psest_3162	0.68	-0.9
3,335,174	-		Psest_3162	0.68	-4.3
3,335,174	-		Psest_3162	0.68	+1.1
3,335,174	-		Psest_3162	0.68	-3.1
3,335,174	-		Psest_3162	0.68	-0.5
3,335,256	+		Psest_3162	0.75	+0.7
3,335,314	+		Psest_3162	0.80	+0.5
3,335,314	+		Psest_3162	0.80	+0.7
3,335,314	+		Psest_3162	0.80	-0.4
3,335,315	-		Psest_3162	0.80	+0.0
3,335,315	-		Psest_3162	0.80	-2.5
3,335,315	-		Psest_3162	0.80	-1.0