Experiment: Polymyxin B sulfate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2730 and Psest_2731 are separated by 708 nucleotides Psest_2731 and Psest_2732 are separated by 300 nucleotides
Psest_2730: Psest_2730 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 2,918,857 to 2,919,573
_2730
Psest_2731: Psest_2731 - ribonucleoside-diphosphate reductase, alpha subunit, at 2,920,282 to 2,923,164
_2731
Psest_2732: Psest_2732 - Ribonucleotide reductase, beta subunit, at 2,923,465 to 2,924,712
_2732
Position (kb)
2920
2921
2922
2923
2924 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2919.504 kb on - strand at 2919.504 kb on - strand at 2919.624 kb on + strand at 2919.706 kb on + strand at 2919.723 kb on - strand at 2919.723 kb on - strand at 2919.723 kb on - strand at 2919.723 kb on - strand at 2919.723 kb on - strand at 2919.734 kb on - strand at 2919.857 kb on + strand at 2919.857 kb on + strand at 2919.857 kb on + strand at 2919.858 kb on - strand at 2919.858 kb on - strand at 2919.881 kb on - strand at 2919.887 kb on + strand at 2919.962 kb on + strand at 2919.963 kb on - strand at 2919.963 kb on - strand at 2920.000 kb on + strand at 2920.046 kb on + strand at 2920.046 kb on + strand at 2920.047 kb on - strand at 2920.083 kb on - strand at 2920.083 kb on - strand at 2920.130 kb on + strand at 2923.230 kb on + strand at 2923.230 kb on + strand at 2923.230 kb on + strand at 2923.230 kb on + strand at 2923.230 kb on + strand at 2923.230 kb on + strand at 2923.238 kb on + strand at 2923.238 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 0.0001 mg/ml remove 2,919,504 - -0.3 2,919,504 - -2.3 2,919,624 + -0.3 2,919,706 + -0.4 2,919,723 - -1.4 2,919,723 - -1.6 2,919,723 - -0.8 2,919,723 - -3.6 2,919,723 - -2.7 2,919,734 - +0.4 2,919,857 + +1.1 2,919,857 + -1.2 2,919,857 + -0.8 2,919,858 - +0.1 2,919,858 - +2.2 2,919,881 - -3.5 2,919,887 + -0.1 2,919,962 + +0.3 2,919,963 - -0.6 2,919,963 - -0.7 2,920,000 + +0.3 2,920,046 + +0.5 2,920,046 + -3.5 2,920,047 - +2.9 2,920,083 - -1.0 2,920,083 - -0.6 2,920,130 + +1.9 2,923,230 + -3.5 2,923,230 + +0.7 2,923,230 + -0.4 2,923,230 + -2.9 2,923,230 + -2.1 2,923,230 + +1.2 2,923,238 + +0.2 2,923,238 + -1.9
Or see this region's nucleotide sequence