Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1882

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
1,991,356	+		Psest_1880	0.12	-0.6
1,991,357	-		Psest_1880	0.12	+0.0
1,991,374	+		Psest_1880	0.17	+1.3
1,991,374	+		Psest_1880	0.17	-0.8
1,991,374	+		Psest_1880	0.17	-1.5
1,991,374	+		Psest_1880	0.17	+0.2
1,991,374	+		Psest_1880	0.17	-1.2
1,991,375	-		Psest_1880	0.17	-2.3
1,991,375	-		Psest_1880	0.17	-1.4
1,991,504	+		Psest_1880	0.52	-4.0
1,991,504	+		Psest_1880	0.52	-0.5
1,991,504	+		Psest_1880	0.52	-1.0
1,991,504	+		Psest_1880	0.52	+1.9
1,991,504	+		Psest_1880	0.52	-1.8
1,991,505	-		Psest_1880	0.52	+1.6
1,991,505	-		Psest_1880	0.52	-4.4
1,991,530	+		Psest_1880	0.59	-0.4
1,991,530	+		Psest_1880	0.59	-1.2
1,991,530	+		Psest_1880	0.59	-1.5
1,991,530	+		Psest_1880	0.59	-0.5
1,991,530	+		Psest_1880	0.59	-3.1
1,991,531	-		Psest_1880	0.59	+0.3
1,991,531	-		Psest_1880	0.59	-1.9
1,991,531	-		Psest_1880	0.59	-2.1
1,991,531	-		Psest_1880	0.59	+0.9
1,991,531	-		Psest_1880	0.59	-1.3
1,991,738	+				-0.3
1,991,738	+				-1.8
1,991,763	+				-0.8
1,992,199	+		Psest_1881	0.75	+0.9
1,992,199	+		Psest_1881	0.75	+0.6
1,992,199	+		Psest_1881	0.75	+0.4
1,992,199	+		Psest_1881	0.75	-0.6
1,992,200	-		Psest_1881	0.75	-2.2
1,992,200	-		Psest_1881	0.75	+1.0
1,992,250	-		Psest_1881	0.84	+1.0
1,992,339	+				-2.1
1,992,339	+				+0.2
1,992,340	-				+0.4
1,992,340	-				-0.9
1,992,340	-				+0.1
1,992,340	-				-0.8
1,992,578	+		Psest_1882	0.18	-0.9
1,993,113	+		Psest_1882	0.58	-1.6
1,993,113	+		Psest_1882	0.58	-2.3
1,993,114	-		Psest_1882	0.58	-0.8
1,993,114	-		Psest_1882	0.58	-3.2
1,993,114	-		Psest_1882	0.58	-2.1
1,993,185	-		Psest_1882	0.63	-1.4
1,993,291	-		Psest_1882	0.71	+0.2
1,993,302	+		Psest_1882	0.72	+2.5
1,993,302	+		Psest_1882	0.72	+0.3
1,993,303	-		Psest_1882	0.72	-1.3
1,993,448	+		Psest_1882	0.82	-0.3
1,993,448	+		Psest_1882	0.82	+0.3
1,993,448	+		Psest_1882	0.82	-1.5
1,993,525	-		Psest_1882	0.88	-1.7
1,993,525	-		Psest_1882	0.88	-1.1
1,993,982	-		Psest_1883	0.50	+0.5
1,994,173	-				+0.4
1,994,195	+				+0.3
1,994,196	-				-0.8
1,994,196	-				-3.2
1,994,277	+				-0.5
1,994,278	-				-1.8
1,994,278	-				-1.0
1,994,342	+				+0.3
1,994,343	-				+0.5
1,994,348	+				-1.1
1,994,349	-				-2.7
1,994,682	+		Psest_1884	0.52	-0.4
1,994,683	-		Psest_1884	0.52	-0.2