Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1862

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
1,965,457	+		Psest_1861	0.38	+0.3
1,965,457	+		Psest_1861	0.38	+2.7
1,965,457	+		Psest_1861	0.38	-1.2
1,965,457	+		Psest_1861	0.38	+1.1
1,965,458	-		Psest_1861	0.38	+1.4
1,965,458	-		Psest_1861	0.38	+2.3
1,965,458	-		Psest_1861	0.38	-1.1
1,965,458	-		Psest_1861	0.38	+1.5
1,965,600	-		Psest_1861	0.48	+0.7
1,965,651	-		Psest_1861	0.52	-0.7
1,965,686	-		Psest_1861	0.55	+0.2
1,965,706	-		Psest_1861	0.56	+1.3
1,965,706	-		Psest_1861	0.56	-3.6
1,965,811	-		Psest_1861	0.64	-2.2
1,965,811	-		Psest_1861	0.64	+1.5
1,966,026	+		Psest_1861	0.80	-0.2
1,966,027	-		Psest_1861	0.80	-1.8
1,966,027	-		Psest_1861	0.80	-2.4
1,966,129	-		Psest_1861	0.88	+0.7
1,966,129	-		Psest_1861	0.88	-0.2
1,966,158	-		Psest_1861	0.90	+1.9
1,966,236	+				-2.2
1,966,237	-				+1.2
1,966,343	+				+1.0
1,966,496	+				+0.1
1,966,771	+				+1.6
1,966,771	+				+2.3
1,966,771	+				+1.2
1,966,771	+				+1.9
1,966,837	+				+3.7
1,966,837	+				-2.5
1,966,878	-				-2.0
1,966,953	+				-3.6
1,966,983	-				+0.9
1,966,986	+				+1.7
1,966,986	+				-1.2
1,966,986	+				+2.7
1,966,986	+				+0.0
1,966,986	+				-1.5
1,966,986	+				-0.6
1,966,986	+				-2.0
1,966,986	+				+0.4
1,966,986	+				+1.6
1,966,986	+				+0.0
1,966,986	+				+2.1
1,966,986	+				-2.2
1,966,986	+				-0.1
1,966,986	+				+0.0
1,966,986	+				-2.5
1,966,986	+				+3.1
1,966,986	+				-1.2
1,966,986	+				+1.6
1,966,987	-				+3.0
1,966,987	-				-0.4
1,966,987	-				+1.5
1,966,987	-				+0.8
1,966,987	-				-0.3
1,966,987	-				+0.1
1,966,987	-				-3.5
1,966,987	-				+3.1
1,966,987	-				-1.8
1,966,987	-				+2.1
1,966,987	-				+0.3
1,966,987	-				-1.6
1,966,987	-				+0.7
1,966,988	+				-1.5
1,966,988	+				+0.1
1,966,988	+				+0.2
1,966,988	+				-1.9
1,966,988	+				+1.3
1,966,988	+				+0.5
1,966,988	+				+0.3
1,966,989	-				-0.4
1,966,989	-				+2.1
1,966,992	+				+1.5
1,966,992	+				-0.3
1,966,992	+				+0.8
1,966,992	+				+2.0
1,966,993	-				-1.1
1,966,993	-				+1.1
1,966,993	-				-3.4
1,966,993	-				+0.2
1,966,993	-				+1.1
1,966,993	-				-0.7
1,966,993	-				-2.1
1,966,993	-				-0.0
1,966,993	-				+0.5
1,966,993	-				-3.9
1,966,993	-				+1.4
1,966,993	-				+0.3
1,967,064	+				+1.8
1,967,065	-				+2.0
1,967,065	-				+0.3
1,967,653	-		Psest_1862	0.18	-2.7
1,967,691	+		Psest_1862	0.18	+0.9
1,967,691	+		Psest_1862	0.18	-1.7
1,967,691	+		Psest_1862	0.18	+0.9
1,967,743	+		Psest_1862	0.19	-2.6
1,967,744	-		Psest_1862	0.19	-1.9
1,967,744	-		Psest_1862	0.19	+0.7
1,967,763	+		Psest_1862	0.19	+0.4
1,967,763	+		Psest_1862	0.19	+0.9
1,967,763	+		Psest_1862	0.19	-1.1
1,967,763	+		Psest_1862	0.19	+1.6
1,967,763	+		Psest_1862	0.19	-2.2
1,967,763	+		Psest_1862	0.19	+0.5
1,967,763	+		Psest_1862	0.19	-0.7
1,967,763	+		Psest_1862	0.19	-0.1
1,967,764	-		Psest_1862	0.19	-0.9
1,967,764	-		Psest_1862	0.19	-2.2
1,967,764	-		Psest_1862	0.19	+1.0
1,967,764	-		Psest_1862	0.19	-3.6
1,967,764	-		Psest_1862	0.19	+0.1
1,967,764	-		Psest_1862	0.19	+1.3
1,968,087	+		Psest_1862	0.24	-2.9
1,968,093	+		Psest_1862	0.24	+0.3
1,971,757	+		Psest_1862	0.75	-1.2
1,971,757	+		Psest_1862	0.75	-3.2
1,971,758	-		Psest_1862	0.75	+0.4
1,971,758	-		Psest_1862	0.75	+0.6
1,971,758	-		Psest_1862	0.75	-3.4
1,971,758	-		Psest_1862	0.75	+1.0
1,971,774	-		Psest_1862	0.75	+1.4
1,971,849	+		Psest_1862	0.76	+0.3
1,971,864	-		Psest_1862	0.76	+1.6
1,971,864	-		Psest_1862	0.76	-0.2
1,971,864	-		Psest_1862	0.76	+0.1
1,971,867	+		Psest_1862	0.76	+1.9
1,971,867	+		Psest_1862	0.76	+2.1
1,971,867	+		Psest_1862	0.76	+1.0
1,971,867	+		Psest_1862	0.76	+0.1
1,971,867	+		Psest_1862	0.76	+1.3
1,971,867	+		Psest_1862	0.76	+2.2
1,971,867	+		Psest_1862	0.76	-2.6
1,971,868	-		Psest_1862	0.76	-3.1
1,971,868	-		Psest_1862	0.76	+1.6
1,971,868	-		Psest_1862	0.76	+0.3
1,971,868	-		Psest_1862	0.76	+1.3
1,971,868	-		Psest_1862	0.76	+0.6
1,971,893	+		Psest_1862	0.77	-3.3
1,971,894	-		Psest_1862	0.77	-0.5
1,971,894	-		Psest_1862	0.77	-2.2
1,971,963	+		Psest_1862	0.78	-2.1
1,971,963	+		Psest_1862	0.78	+0.3
1,971,963	+		Psest_1862	0.78	+0.4
1,971,963	+		Psest_1862	0.78	+0.4
1,971,963	+		Psest_1862	0.78	+0.8
1,971,963	+		Psest_1862	0.78	-0.9
1,971,963	+		Psest_1862	0.78	+1.2
1,971,964	-		Psest_1862	0.78	+1.8
1,971,964	-		Psest_1862	0.78	-1.2
1,971,964	-		Psest_1862	0.78	-0.0
1,971,964	-		Psest_1862	0.78	+0.6
1,971,964	-		Psest_1862	0.78	-1.8
1,971,964	-		Psest_1862	0.78	+1.2
1,971,964	-		Psest_1862	0.78	-3.2
1,971,964	-		Psest_1862	0.78	+1.1
1,972,009	-		Psest_1862	0.78	+0.6
1,972,009	-		Psest_1862	0.78	+2.3
1,972,009	-		Psest_1862	0.78	-3.6
1,972,238	-		Psest_1862	0.82	-0.5
1,972,238	-		Psest_1862	0.82	+1.9
1,972,292	+		Psest_1862	0.82	-3.4
1,972,357	+		Psest_1862	0.83	-2.7
1,972,357	+		Psest_1862	0.83	+1.9
1,972,357	+		Psest_1862	0.83	-0.7
1,972,357	+		Psest_1862	0.83	-3.8
1,972,357	+		Psest_1862	0.83	-3.3
1,972,358	-		Psest_1862	0.83	-1.2
1,972,358	-		Psest_1862	0.83	+0.6
1,972,358	-		Psest_1862	0.83	+2.0
1,972,358	-		Psest_1862	0.83	-0.1
1,972,358	-		Psest_1862	0.83	-0.7
1,972,358	-		Psest_1862	0.83	+0.7
1,972,358	-		Psest_1862	0.83	+1.2
1,972,442	+		Psest_1862	0.84	-0.9
1,972,442	+		Psest_1862	0.84	+2.2
1,972,442	+		Psest_1862	0.84	+0.6
1,972,442	+		Psest_1862	0.84	-2.2
1,972,443	-		Psest_1862	0.84	-0.7
1,972,443	-		Psest_1862	0.84	+0.7
1,972,443	-		Psest_1862	0.84	-3.4
1,972,483	+		Psest_1862	0.85	-1.0
1,972,483	+		Psest_1862	0.85	+2.8
1,972,484	-		Psest_1862	0.85	-2.8
1,972,651	+		Psest_1862	0.87	+1.8
1,972,652	-		Psest_1862	0.87	+0.8
1,972,652	-		Psest_1862	0.87	+2.2
1,972,652	-		Psest_1862	0.87	+1.6
1,972,734	-		Psest_1862	0.89	-3.6
1,972,737	+		Psest_1862	0.89	+2.2
1,972,737	+		Psest_1862	0.89	+1.0
1,972,737	+		Psest_1862	0.89	+0.4
1,972,737	+		Psest_1862	0.89	+0.4
1,972,737	+		Psest_1862	0.89	+1.0
1,972,737	+		Psest_1862	0.89	+1.1
1,972,737	+		Psest_1862	0.89	-0.3
1,972,737	+		Psest_1862	0.89	+3.3
1,972,737	+		Psest_1862	0.89	-0.7
1,972,738	-		Psest_1862	0.89	+0.9
1,972,738	-		Psest_1862	0.89	-2.5
1,972,738	-		Psest_1862	0.89	+0.2
1,972,738	-		Psest_1862	0.89	-0.8
1,972,738	-		Psest_1862	0.89	-0.4
1,972,738	-		Psest_1862	0.89	+1.1
1,972,738	-		Psest_1862	0.89	-3.9
1,972,806	+		Psest_1862	0.90	-0.0
1,972,807	-		Psest_1862	0.90	-0.1
1,972,834	+		Psest_1862	0.90	+0.3
1,972,834	+		Psest_1862	0.90	-0.5
1,972,834	+		Psest_1862	0.90	+1.0
1,972,834	+		Psest_1862	0.90	+2.0
1,972,834	+		Psest_1862	0.90	+0.1
1,972,834	+		Psest_1862	0.90	+0.4
1,972,834	+		Psest_1862	0.90	+2.0
1,972,834	+		Psest_1862	0.90	-3.4
1,972,834	+		Psest_1862	0.90	-1.4
1,972,834	+		Psest_1862	0.90	+0.7
1,972,835	-		Psest_1862	0.90	+0.8
1,972,835	-		Psest_1862	0.90	-0.4
1,972,835	-		Psest_1862	0.90	-1.3
1,972,835	-		Psest_1862	0.90	+0.6
1,972,835	-		Psest_1862	0.90	+1.9
1,972,835	-		Psest_1862	0.90	+1.0
1,972,835	-		Psest_1862	0.90	+0.7
1,972,918	+				-0.0
1,972,945	+				-3.5
1,972,978	-				+0.7
1,973,055	+				-3.4
1,973,055	+				+1.5
1,973,055	+				+1.3
1,973,055	+				-2.4
1,973,056	-				+3.2
1,973,056	-				-0.4
1,973,121	-				+1.0
1,973,124	+				+1.6
1,973,124	+				+0.0
1,973,124	+				-2.1
1,973,125	-				+0.6
1,973,273	+				+0.9
1,973,273	+				+0.3
1,973,274	-				-1.8
1,973,335	+				+1.3
1,973,335	+				-1.9
1,973,335	+				-0.4
1,973,335	+				+0.1
1,973,336	-				+2.9
1,973,336	-				-0.3
1,973,412	-				-0.7
1,973,412	-				-0.2
1,973,487	+				+0.6
1,973,487	+				+0.4
1,973,500	+				+0.0
1,973,625	+				-1.8
1,973,625	+				+1.3
1,973,625	+				-3.3
1,973,625	+				-1.3
1,973,625	+				+0.6
1,973,625	+				+0.3
1,973,625	+				+0.5
1,973,626	-				+2.6
1,973,626	-				+1.8
1,973,626	-				+1.5
1,973,626	-				-0.4
1,973,626	-				+1.1
1,973,626	-				+0.3
1,973,626	-				+0.7
1,973,626	-				+3.1
1,973,626	-				-3.8
1,973,626	-				+0.2
1,973,629	+				+1.2
1,973,629	+				+0.2
1,973,629	+				-2.2
1,973,629	+				+2.8
1,973,629	+				-0.4
1,973,630	-				+0.4
1,973,630	-				+1.0
1,973,755	+		Psest_1863	0.40	+0.5
1,973,755	+		Psest_1863	0.40	+2.9
1,973,755	+		Psest_1863	0.40	-0.2
1,973,756	-		Psest_1863	0.40	+1.2
1,973,924	+		Psest_1863	0.89	+1.2
1,973,925	-		Psest_1863	0.89	+2.5
1,973,958	+				+1.6
1,973,959	-				-0.9
1,973,968	+				+0.2
1,973,968	+				-2.8
1,973,972	+				-2.8
1,974,081	-				+1.4
1,974,176	+				-4.2
1,974,176	+				-2.8
1,974,176	+				+0.7
1,974,176	+				+0.7
1,974,177	-				+1.6
1,974,177	-				+1.3
1,974,177	-				-1.1
1,974,177	-				-0.1
1,974,179	+				+1.4
1,974,179	+				+2.2
1,974,179	+				+4.2
1,974,179	+				+1.7
1,974,180	-				-2.2
1,974,180	-				-0.9
1,974,180	-				+2.3
1,974,180	-				+0.2
1,974,180	-				-3.0
1,974,219	-				+1.8
1,974,288	+				-0.4
1,974,343	-		Psest_1864	0.11	+2.8