Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1564

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
1,663,051	+				-0.8
1,663,700	-		Psest_1563	0.67	+0.2
1,663,700	-		Psest_1563	0.67	-1.3
1,663,700	-		Psest_1563	0.67	-1.9
1,663,700	-		Psest_1563	0.67	+0.7
1,663,927	+				-1.6
1,663,928	-				-1.0
1,663,997	+				+1.6
1,663,997	+				+1.3
1,664,011	+				-0.3
1,664,012	-				-1.6
1,664,012	-				-0.0
1,664,030	-				-0.3
1,664,030	-				-1.6
1,664,457	-		Psest_1564	0.74	-2.3
1,664,603	-				+0.7
1,664,631	+				-0.3
1,664,632	-				-0.8
1,664,632	-				-2.1
1,664,632	-				-0.6
1,664,663	+				-1.2
1,664,666	-				-0.2
1,664,675	+				+0.8
1,664,675	+				-0.1
1,664,677	+				-0.8
1,664,677	+				+1.4
1,664,677	+				-1.7
1,664,677	+				+0.2
1,664,677	+				+0.0
1,664,677	+				+0.0
1,664,677	+				+3.7
1,664,677	+				+0.2
1,664,677	+				-1.6
1,664,677	+				-1.1
1,664,677	+				-2.1
1,664,677	+				-0.1
1,664,677	+				+0.6
1,664,677	+				+0.7
1,664,677	+				+1.1
1,664,677	+				-2.9
1,664,678	-				+0.0
1,664,678	-				+0.0
1,664,678	-				-0.0
1,664,678	-				-0.9
1,664,678	-				-1.3
1,664,678	-				-2.5
1,664,678	-				-1.1
1,664,681	+				-0.2
1,664,681	+				+1.7
1,664,681	+				+0.3
1,664,682	-				-1.9
1,664,908	-		Psest_1565	0.17	+1.8
1,664,909	+		Psest_1565	0.18	-3.1
1,664,909	+		Psest_1565	0.18	-2.3
1,664,910	-		Psest_1565	0.18	-1.3
1,664,910	-		Psest_1565	0.18	+0.7
1,665,079	+		Psest_1565	0.33	+1.7
1,665,279	-		Psest_1565	0.51	-1.4
1,665,418	+		Psest_1565	0.64	+0.3
1,665,418	+		Psest_1565	0.64	-1.8
1,665,419	-		Psest_1565	0.64	+0.1
1,665,472	+		Psest_1565	0.69	+0.4
1,665,473	-		Psest_1565	0.69	+0.8
1,665,473	-		Psest_1565	0.69	-3.0