Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1215

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
1,320,413	+		Psest_1214	0.43	-1.2
1,320,413	+		Psest_1214	0.43	+0.8
1,320,483	+		Psest_1214	0.49	-0.9
1,320,484	-		Psest_1214	0.49	-1.4
1,320,493	+		Psest_1214	0.49	-2.3
1,320,493	+		Psest_1214	0.49	+0.4
1,320,526	-		Psest_1214	0.52	-1.8
1,320,526	-		Psest_1214	0.52	+0.8
1,320,526	-		Psest_1214	0.52	-0.8
1,320,526	-		Psest_1214	0.52	-2.1
1,320,526	-		Psest_1214	0.52	-2.0
1,321,226	+				+1.2
1,321,227	-				+0.2
1,321,285	+				+0.2
1,321,286	-				-0.4
1,321,286	-				+1.2
1,321,286	-				-0.5
1,321,286	-				-0.6
1,321,436	+		Psest_1215	0.32	+0.2
1,321,436	+		Psest_1215	0.32	-1.4
1,321,436	+		Psest_1215	0.32	-1.2
1,321,437	-		Psest_1215	0.32	-1.1
1,321,437	-		Psest_1215	0.32	-0.8
1,321,880	+				-0.8
1,321,881	-				+1.9
1,321,892	+				+0.2
1,321,892	+				+0.3
1,321,892	+				+0.2
1,321,892	+				-0.4
1,321,893	-				-0.4
1,321,893	-				+2.0
1,321,893	-				+0.0
1,321,893	-				+1.5
1,321,899	+				+0.2
1,321,900	-				+1.2
1,321,900	-				-0.6
1,322,136	+				+1.6
1,322,136	+				+1.2
1,322,137	-				+0.2
1,322,137	-				+1.0
1,322,137	-				+3.2
1,322,137	-				-1.7
1,322,137	-				-0.4
1,322,153	+				-0.9
1,322,154	-				+0.2
1,322,206	+				-2.6
1,322,206	+				+1.6
1,322,229	+		Psest_1216	0.10	-1.1
1,322,229	+		Psest_1216	0.10	-0.6
1,322,230	-		Psest_1216	0.10	-0.1
1,322,230	-		Psest_1216	0.10	+0.1