Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1061

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
1,149,378	+				+0.1
1,149,379	-				+0.0
1,149,379	-				+0.6
1,150,161	-				-0.0
1,150,172	+				-0.9
1,150,172	+				-1.4
1,150,173	-				-0.0
1,150,189	+				+0.0
1,150,190	-				-0.1
1,150,190	-				-0.2
1,150,190	-				-1.9
1,150,192	+				-2.3
1,150,193	-				+3.4
1,150,263	+				-0.2
1,150,264	-				-1.0
1,150,362	+		Psest_1061	0.13	-0.3
1,150,362	+		Psest_1061	0.13	-1.9
1,150,362	+		Psest_1061	0.13	-2.0
1,150,362	+		Psest_1061	0.13	-1.2
1,150,362	+		Psest_1061	0.13	+1.3
1,150,362	+		Psest_1061	0.13	+2.1
1,150,363	-		Psest_1061	0.13	-0.3
1,150,363	-		Psest_1061	0.13	-1.1
1,150,363	-		Psest_1061	0.13	+0.0
1,150,363	-		Psest_1061	0.13	-1.4
1,150,363	-		Psest_1061	0.13	-1.4
1,150,363	-		Psest_1061	0.13	-2.4
1,150,363	-		Psest_1061	0.13	-2.4
1,150,363	-		Psest_1061	0.13	+1.6
1,150,363	-		Psest_1061	0.13	-0.9
1,150,392	+		Psest_1061	0.15	-3.0
1,150,393	-		Psest_1061	0.15	-0.6
1,150,401	+		Psest_1061	0.16	-2.6
1,150,405	-		Psest_1061	0.16	-1.2
1,150,710	+		Psest_1061	0.38	-1.4
1,150,711	-		Psest_1061	0.38	-0.1
1,150,711	-		Psest_1061	0.38	+2.1
1,150,714	-		Psest_1061	0.38	+1.3
1,150,764	+		Psest_1061	0.41	-2.0
1,150,764	+		Psest_1061	0.41	+0.9
1,150,764	+		Psest_1061	0.41	+1.7
1,150,764	+		Psest_1061	0.41	-1.2
1,150,765	-		Psest_1061	0.41	+2.5
1,150,765	-		Psest_1061	0.41	-0.9
1,150,765	-		Psest_1061	0.41	-0.2
1,150,765	-		Psest_1061	0.41	-0.3
1,150,765	-		Psest_1061	0.41	+0.1
1,150,765	-		Psest_1061	0.41	+1.6
1,150,765	-		Psest_1061	0.41	-1.2
1,150,765	-		Psest_1061	0.41	-0.4
1,150,893	+		Psest_1061	0.50	+1.4
1,150,894	-		Psest_1061	0.50	-0.9
1,151,094	+		Psest_1061	0.65	+0.8
1,151,094	+		Psest_1061	0.65	-0.4
1,151,094	+		Psest_1061	0.65	-0.0
1,151,094	+		Psest_1061	0.65	+1.1
1,151,094	+		Psest_1061	0.65	-1.4
1,151,178	+		Psest_1061	0.71	+1.4
1,151,178	+		Psest_1061	0.71	+2.3
1,151,179	-		Psest_1061	0.71	-0.4
1,151,193	+		Psest_1061	0.72	+1.1
1,151,193	+		Psest_1061	0.72	-0.6
1,151,194	-		Psest_1061	0.72	-1.4
1,151,194	-		Psest_1061	0.72	-0.9
1,151,194	-		Psest_1061	0.72	-1.9
1,151,194	-		Psest_1061	0.72	+0.1
1,151,286	+		Psest_1061	0.78	-0.4
1,151,286	+		Psest_1061	0.78	-0.3
1,151,287	-		Psest_1061	0.78	-0.2
1,151,287	-		Psest_1061	0.78	+0.1
1,151,287	-		Psest_1061	0.78	+0.3
1,151,641	+				-1.7
1,151,642	-				-1.2
1,151,672	+				-0.9
1,151,672	+				-3.0
1,151,672	+				-0.2
1,151,672	+				-2.0
1,151,672	+				+0.0
1,151,672	+				-0.8
1,151,672	+				+0.1
1,151,672	+				-0.1
1,151,672	+				-0.7
1,151,672	+				-1.7
1,151,672	+				-0.9
1,151,672	+				-2.6
1,151,673	-				+3.5
1,151,673	-				-1.0
1,151,673	-				-0.3
1,151,673	-				+2.0
1,151,673	-				+3.5
1,151,673	-				+0.8
1,151,673	-				-0.9
1,151,673	-				-1.9
1,151,783	+		Psest_1062	0.17	-3.0
1,152,053	+		Psest_1062	0.59	+0.5
1,152,053	+		Psest_1062	0.59	+2.1
1,152,054	-		Psest_1062	0.59	+2.2
1,152,054	-		Psest_1062	0.59	-1.2
1,152,054	-		Psest_1062	0.59	-0.4
1,152,054	-		Psest_1062	0.59	-2.7
1,152,054	-		Psest_1062	0.59	-1.5
1,152,057	-		Psest_1062	0.59	-0.2
1,152,218	+		Psest_1062	0.84	-0.3
1,152,219	-		Psest_1062	0.84	+0.6
1,152,219	-		Psest_1062	0.84	+0.1
1,152,219	-		Psest_1062	0.84	-0.7
1,152,219	-		Psest_1062	0.84	+4.0
1,152,406	+				+1.7
1,152,406	+				-0.4
1,152,406	+				-1.6
1,152,406	+				-1.9
1,152,406	+				+0.2
1,152,406	+				-0.9
1,152,406	+				+0.5
1,152,407	-				-0.1
1,152,407	-				+2.0
1,152,407	-				-1.4
1,152,407	-				+0.7
1,152,407	-				+0.3
1,152,407	-				+0.1
1,152,407	-				-3.1
1,152,407	-				+0.8
1,152,565	+		Psest_1063	0.27	-1.8
1,152,565	+		Psest_1063	0.27	+1.4
1,152,565	+		Psest_1063	0.27	-1.9
1,152,566	-		Psest_1063	0.27	+1.8
1,152,566	-		Psest_1063	0.27	-1.0
1,152,566	-		Psest_1063	0.27	-0.9
1,152,580	+		Psest_1063	0.29	-3.0
1,152,581	-		Psest_1063	0.29	+0.8
1,152,581	-		Psest_1063	0.29	-0.6