Strain Fitness in Shewanella amazonensis SB2B around Sama_3411

Experiment: Chloramphenicol 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0004 mg/ml
4,035,565	+		Sama_3410	0.37	-0.3
4,035,565	+		Sama_3410	0.37	-0.9
4,035,565	+		Sama_3410	0.37	+0.7
4,035,566	-		Sama_3410	0.37	+0.3
4,035,566	-		Sama_3410	0.37	-2.2
4,035,566	-		Sama_3410	0.37	-1.0
4,035,566	-		Sama_3410	0.37	+0.2
4,035,608	+		Sama_3410	0.40	-0.3
4,035,608	+		Sama_3410	0.40	-1.3
4,035,608	+		Sama_3410	0.40	-1.3
4,035,608	+		Sama_3410	0.40	+0.9
4,035,609	-		Sama_3410	0.40	-0.0
4,035,609	-		Sama_3410	0.40	-0.0
4,035,609	-		Sama_3410	0.40	-1.6
4,035,623	-		Sama_3410	0.41	-0.5
4,035,623	-		Sama_3410	0.41	-0.2
4,035,638	+		Sama_3410	0.42	+0.1
4,035,638	+		Sama_3410	0.42	+0.5
4,035,638	+		Sama_3410	0.42	-0.3
4,035,638	+		Sama_3410	0.42	-0.0
4,035,638	+		Sama_3410	0.42	-1.8
4,035,638	+		Sama_3410	0.42	-1.3
4,035,638	+		Sama_3410	0.42	-0.6
4,035,638	+		Sama_3410	0.42	+0.3
4,035,638	+		Sama_3410	0.42	-0.1
4,035,638	+		Sama_3410	0.42	+0.1
4,035,638	+		Sama_3410	0.42	+0.2
4,035,638	+		Sama_3410	0.42	-0.0
4,035,638	+		Sama_3410	0.42	-0.3
4,035,638	+		Sama_3410	0.42	+0.2
4,035,638	+		Sama_3410	0.42	+0.7
4,035,638	+		Sama_3410	0.42	-0.5
4,035,638	+		Sama_3410	0.42	-0.7
4,035,638	+		Sama_3410	0.42	+1.0
4,035,638	+		Sama_3410	0.42	+1.4
4,035,638	+		Sama_3410	0.42	+0.7
4,035,638	+		Sama_3410	0.42	+0.5
4,035,638	+		Sama_3410	0.42	-0.0
4,035,638	+		Sama_3410	0.42	-1.0
4,035,638	+		Sama_3410	0.42	-0.3
4,035,638	+		Sama_3410	0.42	+1.2
4,035,638	+		Sama_3410	0.42	-0.0
4,035,639	-		Sama_3410	0.42	+0.8
4,035,639	-		Sama_3410	0.42	-0.7
4,035,639	-		Sama_3410	0.42	-1.4
4,035,639	-		Sama_3410	0.42	-0.0
4,035,639	-		Sama_3410	0.42	+0.4
4,035,639	-		Sama_3410	0.42	-0.7
4,035,639	-		Sama_3410	0.42	-0.4
4,035,639	-		Sama_3410	0.42	-0.6
4,035,639	-		Sama_3410	0.42	-0.8
4,035,639	-		Sama_3410	0.42	-0.2
4,035,639	-		Sama_3410	0.42	-0.8
4,035,639	-		Sama_3410	0.42	+0.2
4,035,639	-		Sama_3410	0.42	-0.9
4,035,639	-		Sama_3410	0.42	+0.2
4,035,639	-		Sama_3410	0.42	-0.4
4,035,639	-		Sama_3410	0.42	+0.3
4,035,639	-		Sama_3410	0.42	+0.6
4,035,639	-		Sama_3410	0.42	+1.7
4,035,639	-		Sama_3410	0.42	-1.4
4,035,639	-		Sama_3410	0.42	+0.8
4,035,639	-		Sama_3410	0.42	+0.4
4,035,639	-		Sama_3410	0.42	-0.3
4,035,639	-		Sama_3410	0.42	+0.3
4,035,639	-		Sama_3410	0.42	-0.8
4,035,639	-		Sama_3410	0.42	-1.3
4,035,639	-		Sama_3410	0.42	-0.1
4,035,640	+		Sama_3410	0.42	+0.6
4,035,640	+		Sama_3410	0.42	+0.1
4,035,640	+		Sama_3410	0.42	+0.7
4,035,640	+		Sama_3410	0.42	-0.7
4,035,640	+		Sama_3410	0.42	-1.7
4,035,640	+		Sama_3410	0.42	+2.2
4,035,640	+		Sama_3410	0.42	-0.7
4,035,640	+		Sama_3410	0.42	+0.2
4,035,640	+		Sama_3410	0.42	-0.2
4,035,640	+		Sama_3410	0.42	-2.5
4,035,640	+		Sama_3410	0.42	-2.5
4,035,641	-		Sama_3410	0.42	-0.3
4,035,641	-		Sama_3410	0.42	+0.1
4,035,641	-		Sama_3410	0.42	-0.5
4,035,641	-		Sama_3410	0.42	-1.3
4,035,663	+		Sama_3410	0.44	-0.5
4,035,663	+		Sama_3410	0.44	-0.1
4,035,663	+		Sama_3410	0.44	-0.2
4,035,663	+		Sama_3410	0.44	-0.3
4,035,664	-		Sama_3410	0.44	-1.3
4,035,664	-		Sama_3410	0.44	+0.5
4,035,664	-		Sama_3410	0.44	+0.1
4,035,664	-		Sama_3410	0.44	+0.3
4,035,897	+		Sama_3410	0.59	+0.5
4,035,898	-		Sama_3410	0.59	-0.2
4,035,898	-		Sama_3410	0.59	+0.5
4,035,898	-		Sama_3410	0.59	+0.3
4,035,906	+		Sama_3410	0.59	+0.2
4,035,918	+		Sama_3410	0.60	+0.2
4,035,934	+		Sama_3410	0.61	+0.7
4,035,934	+		Sama_3410	0.61	-0.7
4,035,935	-		Sama_3410	0.61	-0.1
4,035,935	-		Sama_3410	0.61	-0.0
4,035,979	+		Sama_3410	0.64	-0.4
4,035,979	+		Sama_3410	0.64	-0.1
4,035,979	+		Sama_3410	0.64	+0.1
4,035,979	+		Sama_3410	0.64	-0.1
4,035,980	-		Sama_3410	0.64	-0.3
4,035,980	-		Sama_3410	0.64	+0.7
4,036,121	-		Sama_3410	0.73	-0.0
4,036,200	-		Sama_3410	0.78	+0.1
4,036,200	-		Sama_3410	0.78	-0.0
4,036,212	+		Sama_3410	0.79	-0.6
4,036,317	+		Sama_3410	0.85	+1.0
4,036,417	+				-0.2
4,036,418	-				-0.5
4,036,428	+				-0.9
4,036,429	-				-0.2
4,036,453	+				-0.2
4,036,458	+				-0.3
4,036,458	+				+0.0
4,036,459	-				+0.4
4,036,489	+				-1.3
4,036,489	+				-0.7
4,036,489	+				+0.1
4,036,489	+				+0.5
4,036,490	-				+1.7
4,036,742	+		Sama_3411	0.61	-0.5
4,036,742	+		Sama_3411	0.61	+0.6
4,036,742	+		Sama_3411	0.61	+0.6
4,036,743	-		Sama_3411	0.62	+0.7
4,036,743	-		Sama_3411	0.62	-0.3
4,036,743	-		Sama_3411	0.62	+0.7
4,036,743	-		Sama_3411	0.62	+0.2
4,036,743	-		Sama_3411	0.62	+1.0
4,036,746	+		Sama_3411	0.62	+0.3
4,036,747	-		Sama_3411	0.63	+1.2
4,036,776	+		Sama_3411	0.72	+0.7
4,036,788	+		Sama_3411	0.75	-0.2
4,036,844	+				-0.3
4,036,844	+				-0.8
4,036,844	+				-0.1
4,036,845	-				+0.9
4,036,845	-				+0.0
4,036,845	-				+0.1
4,036,845	-				+1.1
4,036,845	-				-0.1
4,036,947	-				+0.2
4,036,960	+				-0.8
4,036,973	+				-1.4
4,036,976	+				-0.8
4,036,976	+				+0.7
4,036,976	+				-1.8
4,036,976	+				+0.8
4,036,976	+				+0.3
4,036,977	-				-1.6
4,036,977	-				-0.9
4,036,977	-				+0.5
4,036,977	-				+1.1
4,036,977	-				+0.3
4,037,075	+				-0.6
4,037,077	+				+0.3
4,037,099	+				+0.1
4,037,099	+				+0.1
4,037,100	-				+0.2
4,037,240	-		Sama_3412	0.12	+0.7
4,037,253	+		Sama_3412	0.13	-0.0
4,037,254	-		Sama_3412	0.13	+0.3
4,037,254	-		Sama_3412	0.13	-0.2
4,037,254	-		Sama_3412	0.13	-1.4
4,037,256	+		Sama_3412	0.13	+0.8
4,037,256	+		Sama_3412	0.13	-0.6
4,037,256	+		Sama_3412	0.13	-1.1
4,037,256	+		Sama_3412	0.13	+0.1
4,037,257	-		Sama_3412	0.13	-1.3
4,037,257	-		Sama_3412	0.13	-0.6
4,037,257	-		Sama_3412	0.13	-0.3
4,037,257	-		Sama_3412	0.13	-0.8
4,037,257	-		Sama_3412	0.13	+0.7
4,037,272	-		Sama_3412	0.14	+0.7
4,037,272	-		Sama_3412	0.14	+0.3
4,037,310	+		Sama_3412	0.16	+1.1
4,037,310	+		Sama_3412	0.16	-0.4
4,037,310	+		Sama_3412	0.16	-0.3
4,037,310	+		Sama_3412	0.16	+0.4
4,037,311	-		Sama_3412	0.16	-0.5
4,037,311	-		Sama_3412	0.16	-0.5
4,037,311	-		Sama_3412	0.16	-1.2
4,037,311	-		Sama_3412	0.16	+0.1
4,037,311	-		Sama_3412	0.16	+0.8
4,037,311	-		Sama_3412	0.16	-1.0
4,037,311	-		Sama_3412	0.16	+0.4
4,037,311	-		Sama_3412	0.16	+0.7
4,037,311	-		Sama_3412	0.16	-1.6
4,037,413	-		Sama_3412	0.21	+0.3
4,037,435	+		Sama_3412	0.22	-0.1
4,037,485	+		Sama_3412	0.24	-0.5
4,037,485	+		Sama_3412	0.24	+0.7
4,037,486	-		Sama_3412	0.24	+0.7
4,037,486	-		Sama_3412	0.24	+1.0
4,037,486	-		Sama_3412	0.24	+0.7
4,037,486	-		Sama_3412	0.24	-0.2
4,037,486	-		Sama_3412	0.24	-0.9
4,037,534	+		Sama_3412	0.27	-0.5
4,037,534	+		Sama_3412	0.27	-0.6
4,037,542	+		Sama_3412	0.27	+0.1
4,037,543	-		Sama_3412	0.27	-0.5
4,037,586	+		Sama_3412	0.29	-1.5
4,037,587	-		Sama_3412	0.29	-0.1
4,037,615	+		Sama_3412	0.30	-0.2
4,037,615	+		Sama_3412	0.30	+0.2
4,037,615	+		Sama_3412	0.30	+0.9
4,037,615	+		Sama_3412	0.30	-0.9
4,037,616	-		Sama_3412	0.30	+0.9
4,037,616	-		Sama_3412	0.30	-0.7
4,037,616	-		Sama_3412	0.30	-1.2
4,037,639	+		Sama_3412	0.32	+0.1
4,037,639	+		Sama_3412	0.32	-0.5
4,037,660	+		Sama_3412	0.33	-0.3
4,037,700	+		Sama_3412	0.35	-1.1
4,037,701	-		Sama_3412	0.35	+1.7
4,037,701	-		Sama_3412	0.35	-0.8
4,037,701	-		Sama_3412	0.35	+0.8
4,037,701	-		Sama_3412	0.35	+0.4
4,037,722	+		Sama_3412	0.36	-1.5
4,037,723	-		Sama_3412	0.36	-1.0
4,037,835	+		Sama_3412	0.41	-0.4
4,037,835	+		Sama_3412	0.41	+0.2
4,037,835	+		Sama_3412	0.41	-0.4
4,037,835	+		Sama_3412	0.41	+0.0
4,037,835	+		Sama_3412	0.41	+0.3
4,037,836	-		Sama_3412	0.41	-0.5