Strain Fitness in Shewanella oneidensis MR-1 around SO1062

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,101,271	+		SO1061	0.29	+0.7
1,101,455	+		SO1061	0.42	+0.7
1,101,542	+		SO1061	0.48	-0.3
1,101,600	-		SO1061	0.52	-0.8
1,101,696	+		SO1061	0.59	-0.2
1,101,723	-		SO1061	0.61	+0.1
1,101,753	+		SO1061	0.63	+0.3
1,101,758	+		SO1061	0.64	-1.0
1,101,907	+		SO1061	0.74	+0.1
1,101,940	+		SO1061	0.77	+0.5
1,102,103	+		SO1061	0.88	+0.5
1,102,108	+		SO1061	0.89	+0.8
1,102,117	-		SO1061	0.89	-0.5
1,102,152	-				+0.6
1,102,497	-	def-2	SO1062	0.43	-0.7
1,102,505	-	def-2	SO1062	0.44	-0.8
1,102,580	+	def-2	SO1062	0.58	+0.2
1,102,887	+				+0.0
1,102,889	+	slyX	SO1063	0.11	-0.8
1,103,009	-	slyX	SO1063	0.67	-0.3
1,103,073	+				+0.1
1,103,085	+				-0.6
1,103,085	+				-0.5
1,103,190	+		SO1064	0.11	+1.1
1,103,199	-		SO1064	0.12	-0.7
1,103,263	-		SO1064	0.18	-0.6
1,103,411	+		SO1064	0.34	+0.5
1,103,433	-		SO1064	0.36	-0.6
1,103,435	+		SO1064	0.36	+0.3
1,103,437	+		SO1064	0.37	+0.2
1,103,443	-		SO1064	0.37	-0.4
1,103,443	-		SO1064	0.37	-0.5
1,103,499	+		SO1064	0.43	-0.9
1,103,529	+		SO1064	0.46	-0.0
1,103,529	+		SO1064	0.46	+0.2
1,103,549	-		SO1064	0.48	-0.0
1,103,627	+		SO1064	0.57	+0.6
1,103,627	+		SO1064	0.57	-0.3
1,103,650	-		SO1064	0.59	+0.0
1,103,662	+		SO1064	0.60	-0.5
1,103,709	+		SO1064	0.65	-0.4
1,103,748	-		SO1064	0.69	+0.4