Strain Fitness in Shewanella oneidensis MR-1 around SO2236

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,351,696	+				+0.8
2,351,916	+				+1.8
2,352,071	-				+2.1
2,352,218	-		SO2234	0.19	+2.4
2,352,316	+		SO2234	0.45	+1.6
2,352,339	+		SO2234	0.52	+0.2
2,352,452	-		SO2234	0.82	+2.5
2,352,521	+				+0.5
2,352,662	-				+1.6
2,352,717	-	crr	SO2236	0.10	+1.4
2,352,872	+	crr	SO2236	0.41	+1.2
2,352,879	+	crr	SO2236	0.42	-0.3
2,352,879	+	crr	SO2236	0.42	+1.2
2,352,879	+	crr	SO2236	0.42	+0.6
2,352,912	+	crr	SO2236	0.49	+1.5
2,352,912	+	crr	SO2236	0.49	+1.3
2,352,993	+	crr	SO2236	0.65	+1.1
2,353,143	-				+2.5
2,353,216	+				+1.5
2,353,258	+				+2.2
2,353,376	+				-1.4
2,353,384	-				+1.1
2,353,800	+	ptsI	SO2237	0.33	+1.1
2,354,095	+	ptsI	SO2237	0.50	+2.3