Strain Fitness in Shewanella oneidensis MR-1 around SO2215

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,327,001	+		SO_2214	0.22	+0.8
2,327,009	-		SO_2214	0.23	-0.5
2,327,009	-		SO_2214	0.23	-0.8
2,327,425	-		SO_2214	0.62	+0.5
2,327,434	+		SO_2214	0.63	-0.9
2,327,630	-		SO_2214	0.82	+0.0
2,327,778	+				+0.5
2,327,786	-				+0.3
2,327,939	-				+0.6
2,327,962	+				-0.6
2,328,049	+				+0.2
2,328,057	-				+0.0
2,328,057	-				-0.4
2,328,057	-				+0.5
2,328,057	-				+0.8
2,328,159	-		SO2215	0.15	-0.2
2,328,210	-		SO2215	0.20	-0.1
2,328,239	+		SO2215	0.22	-0.1
2,328,307	-		SO2215	0.28	+0.3
2,328,309	+		SO2215	0.28	+0.9
2,328,309	+		SO2215	0.28	-0.0
2,328,317	-		SO2215	0.28	-0.4
2,328,375	+		SO2215	0.33	+0.2
2,328,375	+		SO2215	0.33	+0.5
2,328,375	+		SO2215	0.33	+0.8
2,328,375	+		SO2215	0.33	+0.3
2,328,383	-		SO2215	0.34	+0.7
2,328,590	-		SO2215	0.51	+0.4
2,328,748	-		SO2215	0.64	+0.2
2,328,914	-		SO2215	0.78	+0.3
2,328,935	-		SO2215	0.79	+0.5
2,329,335	+				+0.1
2,329,640	+		SO2216	0.13	-0.4
2,329,661	+		SO2216	0.14	+1.0
2,329,757	+		SO2216	0.18	-0.7
2,329,765	-		SO2216	0.18	+0.3
2,329,765	-		SO2216	0.18	+0.4
2,329,777	+		SO2216	0.19	+0.1