Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4326

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
4,525,111	+				-0.7
4,525,112	-				-0.3
4,525,154	+				-0.2
4,525,154	+				+0.3
4,525,154	+				+0.3
4,525,155	-				-0.1
4,525,155	-				+0.1
4,525,155	-				+1.0
4,525,191	+				-0.8
4,525,191	+				-2.4
4,525,191	+				+1.0
4,525,191	+				-1.0
4,525,192	-				+0.4
4,525,192	-				+0.2
4,525,192	-				+1.3
4,525,192	-				-2.6
4,525,192	-				+0.3
4,525,192	-				+1.5
4,525,314	+				+0.7
4,525,314	+				+0.2
4,525,387	+				+0.6
4,525,516	+		Psest_4325	0.16	+0.3
4,525,517	-		Psest_4325	0.16	-0.2
4,525,517	-		Psest_4325	0.16	-0.0
4,525,737	+		Psest_4325	0.75	-0.5
4,525,828	+				-2.6
4,525,828	+				-1.2
4,525,854	+				-0.3
4,525,854	+				+0.8
4,525,854	+				+0.1
4,525,855	-				-0.1
4,525,855	-				+0.8
4,525,855	-				-1.6
4,525,855	-				-0.2
4,525,856	+				+0.5
4,525,857	-				-1.6
4,525,857	-				+1.0
4,525,857	-				-0.7
4,525,868	+				+0.6
4,525,874	+				-0.4
4,525,874	+				+0.5
4,525,875	-				+0.1
4,525,968	+				+0.0
4,525,968	+				-0.4
4,525,968	+				+2.1
4,525,969	-				+0.1
4,526,048	+				+0.4
4,526,109	+				-1.6
4,526,110	-				+1.0
4,526,110	-				-0.7
4,526,110	-				-0.8
4,526,249	+		Psest_4326	0.16	-0.6
4,526,250	-		Psest_4326	0.16	-0.6
4,526,250	-		Psest_4326	0.16	-2.9
4,526,250	-		Psest_4326	0.16	-1.3
4,526,250	-		Psest_4326	0.16	-1.4
4,526,250	-		Psest_4326	0.16	-1.6
4,526,396	+		Psest_4326	0.29	-0.6
4,526,396	+		Psest_4326	0.29	-1.1
4,526,396	+		Psest_4326	0.29	+0.2
4,526,396	+		Psest_4326	0.29	-0.4
4,526,396	+		Psest_4326	0.29	-0.0
4,526,396	+		Psest_4326	0.29	+0.2
4,526,397	-		Psest_4326	0.29	-1.6
4,526,397	-		Psest_4326	0.29	-0.2
4,526,397	-		Psest_4326	0.29	-1.6
4,526,397	-		Psest_4326	0.29	-0.0
4,526,397	-		Psest_4326	0.29	+1.1
4,526,397	-		Psest_4326	0.29	-1.6
4,526,456	+		Psest_4326	0.35	-1.2
4,526,456	+		Psest_4326	0.35	-1.6
4,526,457	-		Psest_4326	0.35	-1.3
4,526,457	-		Psest_4326	0.35	-1.2
4,526,457	-		Psest_4326	0.35	-0.7
4,526,457	-		Psest_4326	0.35	-0.2
4,526,462	+		Psest_4326	0.35	+0.8
4,526,462	+		Psest_4326	0.35	-0.3
4,526,462	+		Psest_4326	0.35	-1.4
4,526,462	+		Psest_4326	0.35	-0.0
4,526,463	-		Psest_4326	0.35	-1.1
4,526,463	-		Psest_4326	0.35	-3.0
4,526,463	-		Psest_4326	0.35	-4.4
4,526,463	-		Psest_4326	0.35	+0.3
4,526,463	-		Psest_4326	0.35	-0.2
4,526,463	-		Psest_4326	0.35	+0.5
4,526,463	-		Psest_4326	0.35	-0.8
4,526,463	-		Psest_4326	0.35	+0.2
4,526,463	-		Psest_4326	0.35	-1.7
4,526,546	+		Psest_4326	0.43	+0.1
4,526,547	-		Psest_4326	0.43	+0.1
4,526,547	-		Psest_4326	0.43	-1.7
4,526,547	-		Psest_4326	0.43	-0.7
4,526,720	+		Psest_4326	0.58	-1.1
4,526,721	-		Psest_4326	0.58	-0.3
4,526,801	+		Psest_4326	0.65	-1.5
4,526,802	-		Psest_4326	0.65	-0.8
4,526,906	+		Psest_4326	0.74	+0.7
4,526,907	-		Psest_4326	0.74	+0.8
4,527,104	+				-0.6
4,527,105	-				-0.4
4,527,194	+				-0.4
4,527,194	+				-0.5
4,527,323	+				-2.2
4,527,323	+				-2.4
4,527,323	+				-0.1
4,527,323	+				-0.1
4,527,323	+				+0.4
4,527,323	+				-1.2
4,527,323	+				-0.8
4,527,323	+				-0.0
4,527,324	-				-1.7
4,527,324	-				+0.3
4,527,324	-				-0.9
4,527,324	-				-0.1
4,527,324	-				+0.8
4,527,324	-				+0.4
4,527,445	+		Psest_4327	0.14	-0.1
4,527,445	+		Psest_4327	0.14	-0.3
4,527,446	-		Psest_4327	0.14	-0.9
4,527,446	-		Psest_4327	0.14	+0.2
4,527,446	-		Psest_4327	0.14	-1.0
4,527,446	-		Psest_4327	0.14	-0.7
4,527,446	-		Psest_4327	0.14	+0.4
4,527,446	-		Psest_4327	0.14	+0.8
4,527,653	+		Psest_4327	0.27	+1.0
4,527,653	+		Psest_4327	0.27	-2.0
4,527,654	-		Psest_4327	0.27	-1.0
4,527,654	-		Psest_4327	0.27	+0.2
4,527,674	+		Psest_4327	0.28	+0.1
4,527,674	+		Psest_4327	0.28	-0.7
4,527,675	-		Psest_4327	0.28	-0.6
4,527,675	-		Psest_4327	0.28	-1.2
4,527,963	+		Psest_4327	0.46	-3.3
4,527,963	+		Psest_4327	0.46	-2.0
4,527,963	+		Psest_4327	0.46	+0.5
4,527,963	+		Psest_4327	0.46	-0.2
4,527,963	+		Psest_4327	0.46	+0.6
4,527,964	-		Psest_4327	0.46	-0.4
4,527,964	-		Psest_4327	0.46	+2.3
4,527,992	+		Psest_4327	0.48	-1.3
4,527,992	+		Psest_4327	0.48	-1.3
4,527,992	+		Psest_4327	0.48	-0.0
4,527,992	+		Psest_4327	0.48	-1.7
4,527,992	+		Psest_4327	0.48	-0.7
4,527,992	+		Psest_4327	0.48	-0.9
4,527,992	+		Psest_4327	0.48	-3.8
4,527,992	+		Psest_4327	0.48	+1.3
4,527,992	+		Psest_4327	0.48	-0.7
4,527,993	-		Psest_4327	0.48	-1.1
4,527,993	-		Psest_4327	0.48	+0.4
4,527,993	-		Psest_4327	0.48	-0.0
4,527,993	-		Psest_4327	0.48	+0.3
4,527,993	-		Psest_4327	0.48	-0.5
4,527,993	-		Psest_4327	0.48	-0.9
4,527,993	-		Psest_4327	0.48	+0.8
4,527,993	-		Psest_4327	0.48	-1.0
4,528,083	-		Psest_4327	0.53	-0.8
4,528,178	+		Psest_4327	0.59	+1.3
4,528,178	+		Psest_4327	0.59	-0.2
4,528,178	+		Psest_4327	0.59	+0.3
4,528,178	+		Psest_4327	0.59	-1.2
4,528,178	+		Psest_4327	0.59	+0.8
4,528,179	-		Psest_4327	0.59	-0.2