Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4320

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
4,518,552	+		Psest_4318	0.73	+0.5
4,518,552	+		Psest_4318	0.73	-2.7
4,518,552	+		Psest_4318	0.73	+0.1
4,518,553	-		Psest_4318	0.73	+2.3
4,518,715	+				-0.0
4,518,715	+				-0.7
4,518,716	-				+2.3
4,518,716	-				+0.7
4,518,716	-				+1.3
4,518,716	-				-0.6
4,518,716	-				+0.8
4,518,716	-				+1.2
4,518,716	-				+1.1
4,518,716	-				+0.8
4,518,716	-				-0.2
4,518,716	-				+1.7
4,518,716	-				+1.5
4,518,716	-				+1.8
4,518,730	+		Psest_4319	0.10	+0.1
4,518,731	-		Psest_4319	0.10	-0.3
4,518,731	-		Psest_4319	0.10	+1.5
4,518,793	+		Psest_4319	0.22	+0.2
4,518,793	+		Psest_4319	0.22	-0.8
4,518,793	+		Psest_4319	0.22	-0.5
4,518,793	+		Psest_4319	0.22	+0.3
4,518,793	+		Psest_4319	0.22	-0.2
4,518,793	+		Psest_4319	0.22	-1.6
4,518,793	+		Psest_4319	0.22	-1.0
4,518,794	-		Psest_4319	0.22	-2.0
4,518,997	+		Psest_4319	0.60	+2.1
4,519,214	+				-0.9
4,519,215	-				-1.0
4,519,215	-				+2.5
4,519,248	+				+0.0
4,519,248	+				-1.2
4,519,248	+				+1.1
4,519,248	+				+0.5
4,519,248	+				-0.2
4,519,248	+				-0.8
4,519,249	-				-0.1
4,519,249	-				-0.9
4,519,249	-				-0.8
4,519,252	+				-1.4
4,519,252	+				+1.9
4,519,252	+				-1.0
4,519,252	+				+1.1
4,519,252	+				+0.3
4,519,252	+				+1.3
4,519,252	+				-0.7
4,519,252	+				-1.2
4,519,253	-				-0.2
4,519,253	-				-0.2
4,519,253	-				-0.5
4,519,317	+				-1.0
4,519,321	+				+0.2
4,519,388	+				-1.6
4,519,388	+				-1.2
4,519,388	+				-1.6
4,519,389	-				-0.7
4,519,389	-				+1.3
4,519,516	-				-1.8
4,519,734	+		Psest_4320	0.13	-0.1
4,519,735	-		Psest_4320	0.13	-1.6
4,519,764	+		Psest_4320	0.14	-1.2
4,519,765	-		Psest_4320	0.14	-1.2
4,519,765	-		Psest_4320	0.14	-1.4
4,519,767	+		Psest_4320	0.14	+0.9
4,519,768	-		Psest_4320	0.15	-0.7
4,519,768	-		Psest_4320	0.15	-1.7
4,519,768	-		Psest_4320	0.15	-2.0
4,519,768	-		Psest_4320	0.15	-1.6
4,519,768	-		Psest_4320	0.15	+0.3
4,520,133	+		Psest_4320	0.32	+0.5
4,520,133	+		Psest_4320	0.32	-0.2
4,520,133	+		Psest_4320	0.32	-2.4
4,520,133	+		Psest_4320	0.32	-1.2
4,520,133	+		Psest_4320	0.32	-0.4
4,520,133	+		Psest_4320	0.32	-0.1
4,520,134	-		Psest_4320	0.32	-0.8
4,520,134	-		Psest_4320	0.32	-1.7
4,520,134	-		Psest_4320	0.32	+0.6
4,520,134	-		Psest_4320	0.32	-1.6
4,520,134	-		Psest_4320	0.32	+1.8
4,520,136	+		Psest_4320	0.32	-1.8
4,520,137	-		Psest_4320	0.33	-1.6
4,520,152	-		Psest_4320	0.33	+0.1
4,520,152	-		Psest_4320	0.33	+1.8
4,520,152	-		Psest_4320	0.33	-0.2
4,520,184	+		Psest_4320	0.35	-0.2
4,520,184	+		Psest_4320	0.35	-1.2
4,520,184	+		Psest_4320	0.35	+1.2
4,520,184	+		Psest_4320	0.35	-1.0
4,520,185	-		Psest_4320	0.35	+0.6
4,520,485	-		Psest_4320	0.49	+0.2
4,520,511	+		Psest_4320	0.51	-0.8
4,520,511	+		Psest_4320	0.51	+0.8
4,520,542	-		Psest_4320	0.52	+1.2
4,520,542	-		Psest_4320	0.52	+0.8
4,520,542	-		Psest_4320	0.52	+0.1
4,520,707	-		Psest_4320	0.60	-2.7
4,521,240	+		Psest_4320	0.86	-2.7
4,521,298	-		Psest_4320	0.89	-0.6
4,521,300	+		Psest_4320	0.89	-0.6
4,521,300	+		Psest_4320	0.89	-0.4
4,521,300	+		Psest_4320	0.89	-0.5
4,521,301	-		Psest_4320	0.89	+0.3
4,521,301	-		Psest_4320	0.89	-1.0
4,521,301	-		Psest_4320	0.89	-0.9
4,521,301	-		Psest_4320	0.89	-1.0
4,521,306	+		Psest_4320	0.89	-0.2
4,521,306	+		Psest_4320	0.89	+0.8
4,521,306	+		Psest_4320	0.89	+1.2
4,521,306	+		Psest_4320	0.89	-1.8
4,521,306	+		Psest_4320	0.89	-0.4
4,521,306	+		Psest_4320	0.89	-0.4
4,521,306	+		Psest_4320	0.89	-2.0
4,521,306	+		Psest_4320	0.89	-0.5
4,521,306	+		Psest_4320	0.89	-1.0
4,521,306	+		Psest_4320	0.89	-2.2
4,521,306	+		Psest_4320	0.89	-2.9
4,521,306	+		Psest_4320	0.89	-0.2
4,521,306	+		Psest_4320	0.89	-0.5
4,521,307	-		Psest_4320	0.90	-0.8
4,521,307	-		Psest_4320	0.90	+0.8
4,521,307	-		Psest_4320	0.90	-0.4
4,521,307	-		Psest_4320	0.90	-0.5
4,521,307	-		Psest_4320	0.90	-1.8
4,521,307	-		Psest_4320	0.90	-1.4
4,521,307	-		Psest_4320	0.90	+1.3
4,521,307	-		Psest_4320	0.90	-0.9
4,521,437	-				-1.5
4,521,437	-				+0.2
4,521,531	+				+0.9
4,521,795	-				-1.8
4,521,902	+		Psest_4322	0.13	+0.5
4,522,104	-		Psest_4322	0.39	+0.6
4,522,104	-		Psest_4322	0.39	+0.6
4,522,104	-		Psest_4322	0.39	-0.7
4,522,104	-		Psest_4322	0.39	-0.0
4,522,104	-		Psest_4322	0.39	-0.8
4,522,240	+		Psest_4322	0.56	-1.2
4,522,240	+		Psest_4322	0.56	+0.0
4,522,240	+		Psest_4322	0.56	-2.0
4,522,240	+		Psest_4322	0.56	+0.8
4,522,240	+		Psest_4322	0.56	+0.6
4,522,240	+		Psest_4322	0.56	+0.4
4,522,240	+		Psest_4322	0.56	-1.8
4,522,241	-		Psest_4322	0.56	-0.2
4,522,241	-		Psest_4322	0.56	-2.8
4,522,241	-		Psest_4322	0.56	-0.5
4,522,241	-		Psest_4322	0.56	-1.2
4,522,241	-		Psest_4322	0.56	-2.0
4,522,243	-		Psest_4322	0.57	-0.5
4,522,243	-		Psest_4322	0.57	-0.6
4,522,255	-		Psest_4322	0.58	-0.7
4,522,255	-		Psest_4322	0.58	-2.2
4,522,255	-		Psest_4322	0.58	-0.5