Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4294

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
4,486,006	+		Psest_4293	0.36	+2.3
4,486,006	+		Psest_4293	0.36	+0.6
4,486,007	-		Psest_4293	0.36	+0.5
4,486,429	+		Psest_4293	0.78	+0.7
4,486,429	+		Psest_4293	0.78	+0.4
4,486,429	+		Psest_4293	0.78	+1.0
4,486,429	+		Psest_4293	0.78	+1.8
4,486,429	+		Psest_4293	0.78	+1.3
4,486,429	+		Psest_4293	0.78	+0.1
4,486,430	-		Psest_4293	0.78	+1.6
4,486,430	-		Psest_4293	0.78	+0.2
4,486,430	-		Psest_4293	0.78	-1.4
4,486,430	-		Psest_4293	0.78	-0.2
4,486,430	-		Psest_4293	0.78	+1.3
4,486,430	-		Psest_4293	0.78	+0.5
4,486,437	+		Psest_4293	0.79	+0.9
4,486,452	+		Psest_4293	0.80	+0.1
4,486,452	+		Psest_4293	0.80	+0.2
4,486,452	+		Psest_4293	0.80	+0.2
4,486,452	+		Psest_4293	0.80	-0.8
4,486,453	-		Psest_4293	0.80	+0.5
4,486,453	-		Psest_4293	0.80	+0.1
4,486,695	+				-2.9
4,486,695	+				-1.6
4,486,695	+				-1.4
4,486,695	+				+0.0
4,486,695	+				+0.1
4,486,695	+				-0.1
4,486,695	+				+1.8
4,486,695	+				+1.0
4,486,696	-				-2.4
4,486,696	-				-2.4
4,486,696	-				+1.1
4,486,696	-				-3.6
4,486,696	-				+0.3
4,486,696	-				-1.0
4,486,696	-				-1.8
4,486,700	+				-0.2
4,486,701	-				-0.3
4,486,701	-				-2.2
4,486,807	+				+0.8
4,486,807	+				+2.1
4,486,808	-				-0.1
4,486,847	+				-1.8
4,486,847	+				+0.3
4,486,954	+		Psest_4294	0.15	-0.7
4,486,954	+		Psest_4294	0.15	+0.3
4,486,954	+		Psest_4294	0.15	+1.2
4,486,954	+		Psest_4294	0.15	+0.4
4,486,955	-		Psest_4294	0.15	+1.2
4,486,955	-		Psest_4294	0.15	-0.9
4,486,955	-		Psest_4294	0.15	-0.1
4,487,578	+		Psest_4294	0.67	+1.8
4,487,578	+		Psest_4294	0.67	+2.3
4,487,620	+		Psest_4294	0.71	-1.7
4,487,620	+		Psest_4294	0.71	-0.8
4,487,620	+		Psest_4294	0.71	-0.2
4,487,620	+		Psest_4294	0.71	-0.2
4,487,620	+		Psest_4294	0.71	+1.2
4,487,621	-		Psest_4294	0.71	-0.2
4,487,621	-		Psest_4294	0.71	-0.8
4,487,621	-		Psest_4294	0.71	-1.4
4,487,624	+		Psest_4294	0.71	-0.4
4,487,624	+		Psest_4294	0.71	-1.4
4,487,624	+		Psest_4294	0.71	-0.2
4,487,624	+		Psest_4294	0.71	+0.8
4,487,624	+		Psest_4294	0.71	-0.2
4,487,625	-		Psest_4294	0.71	+0.3
4,487,625	-		Psest_4294	0.71	+0.4
4,487,625	-		Psest_4294	0.71	-2.2
4,487,625	-		Psest_4294	0.71	-1.4
4,487,625	-		Psest_4294	0.71	-1.7
4,487,625	-		Psest_4294	0.71	+0.1
4,487,659	+		Psest_4294	0.74	-0.4
4,487,659	+		Psest_4294	0.74	-0.8
4,487,659	+		Psest_4294	0.74	-1.8
4,487,659	+		Psest_4294	0.74	-2.2
4,487,659	+		Psest_4294	0.74	-1.8
4,487,660	-		Psest_4294	0.74	-0.4
4,487,660	-		Psest_4294	0.74	-1.5
4,487,660	-		Psest_4294	0.74	-1.7
4,487,660	-		Psest_4294	0.74	+0.6
4,487,660	-		Psest_4294	0.74	-1.8
4,487,660	-		Psest_4294	0.74	-2.2
4,487,660	-		Psest_4294	0.74	-2.7
4,487,660	-		Psest_4294	0.74	-0.9
4,487,660	-		Psest_4294	0.74	-0.7
4,487,949	+				+0.8
4,487,966	+				-3.8
4,487,966	+				+0.3
4,487,966	+				-0.2
4,487,966	+				-0.8
4,487,966	+				+0.5
4,487,966	+				+0.0
4,487,966	+				+1.1
4,487,966	+				-2.6
4,487,966	+				+1.8
4,487,966	+				+0.3
4,487,966	+				+0.0
4,487,967	-				+0.2
4,487,967	-				-0.7
4,487,967	-				-0.9
4,487,967	-				-0.2
4,487,967	-				-1.7
4,487,967	-				-1.4
4,487,967	-				-0.6
4,487,967	-				+0.3
4,487,967	-				-1.0
4,487,967	-				-1.8
4,487,967	-				+0.3
4,487,967	-				-0.6
4,487,967	-				+1.3
4,487,967	-				-0.7
4,487,967	-				-1.1
4,487,967	-				-0.8
4,487,967	-				-1.2
4,488,034	-				-1.0
4,488,050	-				-0.8
4,488,231	+				-0.6
4,488,231	+				-0.2
4,488,231	+				+0.8
4,488,231	+				+1.1
4,488,231	+				+0.8
4,488,231	+				+1.2
4,488,231	+				-1.6
4,488,231	+				+0.8
4,488,231	+				+0.2
4,488,231	+				+1.5
4,488,231	+				-1.2
4,488,231	+				+1.6
4,488,231	+				-0.2
4,488,231	+				+1.5
4,488,231	+				+2.8
4,488,231	+				+1.8
4,488,231	+				+2.2
4,488,231	+				-0.2
4,488,232	-				+0.4
4,488,232	-				-0.7
4,488,232	-				-2.4
4,488,232	-				-0.0
4,488,232	-				+1.2
4,488,232	-				-1.6
4,488,232	-				+0.7
4,488,232	-				+0.1
4,488,232	-				+1.2
4,488,232	-				-1.2
4,488,232	-				+0.1
4,488,232	-				-2.4
4,488,275	+				+2.2
4,488,275	+				+0.8
4,488,275	+				+1.6
4,488,276	-				-0.2
4,488,276	-				+0.3
4,488,478	+				+2.8
4,488,686	+		Psest_4295	0.12	+0.5
4,488,873	+		Psest_4295	0.19	+1.1
4,488,873	+		Psest_4295	0.19	+0.2
4,488,874	-		Psest_4295	0.19	+1.3
4,488,924	+		Psest_4295	0.20	+0.5
4,488,925	-		Psest_4295	0.20	+0.3