Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4150

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
4,332,279	+		Psest_4148	0.83	-0.5
4,332,279	+		Psest_4148	0.83	+0.5
4,332,279	+		Psest_4148	0.83	-1.3
4,332,279	+		Psest_4148	0.83	+2.9
4,332,280	-		Psest_4148	0.83	+0.5
4,332,280	-		Psest_4148	0.83	-1.2
4,332,280	-		Psest_4148	0.83	+0.8
4,332,420	+				+0.2
4,332,420	+				+0.2
4,332,494	-				-0.9
4,332,589	+		Psest_4149	0.22	+1.0
4,332,589	+		Psest_4149	0.22	+0.0
4,332,589	+		Psest_4149	0.22	-0.4
4,332,767	+		Psest_4149	0.46	+0.5
4,332,866	+		Psest_4149	0.60	-0.4
4,332,866	+		Psest_4149	0.60	+1.3
4,333,014	-		Psest_4149	0.80	-0.2
4,333,142	+				+0.1
4,333,143	-				+0.3
4,333,235	+				+0.8
4,333,235	+				-0.2
4,333,235	+				+0.4
4,333,235	+				-0.1
4,333,235	+				+1.2
4,333,236	-				+1.0
4,333,236	-				-1.2
4,333,236	-				+0.8
4,333,239	+				-2.5
4,333,239	+				+0.6
4,333,239	+				+0.1
4,333,239	+				+0.8
4,333,239	+				-1.5
4,333,261	+				-0.8
4,333,261	+				-0.6
4,333,261	+				-0.8
4,333,262	-				+0.8
4,333,469	+		Psest_4150	0.25	-0.6
4,333,469	+		Psest_4150	0.25	-0.4
4,333,470	-		Psest_4150	0.25	+1.5
4,333,478	+		Psest_4150	0.26	+0.6
4,333,479	-		Psest_4150	0.26	-0.5
4,333,589	+		Psest_4150	0.35	+0.0
4,333,730	+		Psest_4150	0.47	+1.3
4,333,730	+		Psest_4150	0.47	-1.5
4,333,730	+		Psest_4150	0.47	-0.2
4,333,730	+		Psest_4150	0.47	+0.4
4,333,730	+		Psest_4150	0.47	+2.4
4,333,730	+		Psest_4150	0.47	+0.0
4,333,730	+		Psest_4150	0.47	+0.4
4,333,730	+		Psest_4150	0.47	-0.2
4,333,731	-		Psest_4150	0.47	-1.9
4,333,731	-		Psest_4150	0.47	+1.0
4,333,731	-		Psest_4150	0.47	+0.8
4,333,731	-		Psest_4150	0.47	+1.4
4,333,731	-		Psest_4150	0.47	+1.1
4,333,731	-		Psest_4150	0.47	+2.0
4,333,731	-		Psest_4150	0.47	-2.7
4,333,733	+		Psest_4150	0.47	+2.0
4,333,733	+		Psest_4150	0.47	+2.0
4,333,733	+		Psest_4150	0.47	+1.2
4,333,772	+		Psest_4150	0.51	-0.0
4,333,772	+		Psest_4150	0.51	+2.2
4,333,772	+		Psest_4150	0.51	-0.6
4,333,772	+		Psest_4150	0.51	-0.1
4,333,808	+		Psest_4150	0.54	+0.6
4,333,808	+		Psest_4150	0.54	+0.3
4,333,808	+		Psest_4150	0.54	+0.8
4,333,808	+		Psest_4150	0.54	+0.4
4,333,808	+		Psest_4150	0.54	+1.6
4,333,823	+		Psest_4150	0.55	+1.0
4,333,823	+		Psest_4150	0.55	-0.8
4,333,823	+		Psest_4150	0.55	-1.5
4,333,823	+		Psest_4150	0.55	+0.9
4,333,823	+		Psest_4150	0.55	+0.1
4,333,823	+		Psest_4150	0.55	+0.3
4,333,823	+		Psest_4150	0.55	+1.1
4,333,824	-		Psest_4150	0.55	-0.4
4,333,824	-		Psest_4150	0.55	-0.2
4,333,824	-		Psest_4150	0.55	-0.5
4,333,824	-		Psest_4150	0.55	-1.1
4,333,824	-		Psest_4150	0.55	-2.0
4,333,824	-		Psest_4150	0.55	+0.0
4,333,824	-		Psest_4150	0.55	+0.0
4,333,835	+		Psest_4150	0.56	-2.0
4,333,835	+		Psest_4150	0.56	+0.8
4,333,835	+		Psest_4150	0.56	+0.1
4,333,835	+		Psest_4150	0.56	+0.2
4,333,835	+		Psest_4150	0.56	+0.7
4,333,835	+		Psest_4150	0.56	+1.2
4,333,836	-		Psest_4150	0.56	+0.3
4,333,836	-		Psest_4150	0.56	-0.6
4,334,039	+		Psest_4150	0.73	+0.9
4,334,039	+		Psest_4150	0.73	+0.5
4,334,039	+		Psest_4150	0.73	+1.4
4,334,039	+		Psest_4150	0.73	+0.6
4,334,039	+		Psest_4150	0.73	+1.4
4,334,039	+		Psest_4150	0.73	+1.2
4,334,039	+		Psest_4150	0.73	+0.4
4,334,039	+		Psest_4150	0.73	-0.4
4,334,039	+		Psest_4150	0.73	+0.8
4,334,039	+		Psest_4150	0.73	+0.6
4,334,039	+		Psest_4150	0.73	+1.3
4,334,039	+		Psest_4150	0.73	+1.0
4,334,039	+		Psest_4150	0.73	-0.2
4,334,039	+		Psest_4150	0.73	-0.6
4,334,039	+		Psest_4150	0.73	-1.2
4,334,039	+		Psest_4150	0.73	-1.5
4,334,039	+		Psest_4150	0.73	+1.5
4,334,039	+		Psest_4150	0.73	-0.1
4,334,040	-		Psest_4150	0.73	+0.9
4,334,040	-		Psest_4150	0.73	-0.8
4,334,040	-		Psest_4150	0.73	-0.7
4,334,040	-		Psest_4150	0.73	+0.6
4,334,040	-		Psest_4150	0.73	+0.7
4,334,040	-		Psest_4150	0.73	+0.7
4,334,040	-		Psest_4150	0.73	-0.9
4,334,040	-		Psest_4150	0.73	-0.2
4,334,040	-		Psest_4150	0.73	-2.0
4,334,040	-		Psest_4150	0.73	-0.4
4,334,040	-		Psest_4150	0.73	+0.4
4,334,040	-		Psest_4150	0.73	+1.2
4,334,040	-		Psest_4150	0.73	+0.5
4,334,040	-		Psest_4150	0.73	+1.8
4,334,040	-		Psest_4150	0.73	-1.8
4,334,040	-		Psest_4150	0.73	+1.6
4,334,040	-		Psest_4150	0.73	-0.4
4,334,040	-		Psest_4150	0.73	-0.4
4,334,094	+		Psest_4150	0.78	+0.2
4,334,443	+				+1.2
4,334,573	-		Psest_4151	0.25	+2.0
4,334,938	+		Psest_4151	0.79	-0.9
4,334,938	+		Psest_4151	0.79	-0.7
4,334,938	+		Psest_4151	0.79	+0.8
4,334,939	-		Psest_4151	0.80	-0.4
4,334,939	-		Psest_4151	0.80	-0.9
4,335,068	+				+0.0
4,335,207	+		Psest_4152	0.31	+1.2
4,335,207	+		Psest_4152	0.31	+0.4
4,335,207	+		Psest_4152	0.31	+0.8
4,335,207	+		Psest_4152	0.31	+1.2
4,335,207	+		Psest_4152	0.31	+0.8
4,335,207	+		Psest_4152	0.31	-0.8
4,335,208	-		Psest_4152	0.31	-1.4
4,335,213	+		Psest_4152	0.32	-0.1
4,335,213	+		Psest_4152	0.32	+0.8
4,335,214	-		Psest_4152	0.33	+0.5
4,335,288	-		Psest_4152	0.50	+1.0
4,335,346	-		Psest_4152	0.63	+1.0