Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4013

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
4,189,182	-				-0.4
4,189,233	-				+0.9
4,189,233	-				+0.6
4,189,242	+				-1.8
4,189,243	-				+0.7
4,189,303	+				-1.3
4,189,383	-				-0.1
4,189,389	-				+1.4
4,189,416	+				-1.1
4,189,416	+				-2.1
4,189,416	+				-2.9
4,189,416	+				+0.3
4,189,416	+				+0.2
4,189,416	+				-3.4
4,189,416	+				-3.5
4,189,416	+				-4.0
4,189,416	+				+0.9
4,189,416	+				-1.5
4,189,416	+				+0.8
4,189,416	+				-0.3
4,189,416	+				-2.4
4,189,416	+				-0.1
4,189,416	+				-1.7
4,189,417	-				+0.2
4,189,417	-				+0.9
4,189,417	-				-0.3
4,189,417	-				+0.9
4,189,417	-				-0.3
4,189,417	-				-0.4
4,189,417	-				+0.6
4,189,417	-				-0.8
4,189,417	-				-0.9
4,189,417	-				+0.9
4,189,417	-				+0.7
4,189,418	+				-0.5
4,189,418	+				-0.9
4,189,419	-				-0.0
4,189,419	-				+0.0
4,189,419	-				-0.4
4,189,419	-				-2.2
4,189,419	-				+0.6
4,189,423	+				-3.5
4,189,423	+				-2.3
4,189,423	+				-1.1
4,189,423	+				-0.1
4,189,423	+				-1.6
4,189,424	-				-0.0
4,189,424	-				+0.4
4,189,424	-				-0.4
4,189,424	-				-0.3
4,189,432	+				-2.3
4,189,432	+				+0.9
4,189,493	+				-1.2
4,189,496	+				+0.1
4,189,496	+				-0.1
4,189,496	+				+1.0
4,189,496	+				-0.2
4,189,497	-				+0.7
4,189,497	-				+0.4
4,189,506	+				-0.8
4,189,506	+				+0.5
4,189,506	+				+0.0
4,189,506	+				-0.8
4,189,506	+				-0.5
4,189,507	-				-0.2
4,189,507	-				+0.3
4,189,507	-				+0.4
4,189,507	-				-0.3
4,189,507	-				-0.2
4,189,584	+		Psest_4012	0.13	-0.1
4,189,584	+		Psest_4012	0.13	-0.6
4,189,584	+		Psest_4012	0.13	+0.7
4,189,584	+		Psest_4012	0.13	+0.5
4,189,584	+		Psest_4012	0.13	-0.9
4,189,584	+		Psest_4012	0.13	+0.8
4,189,584	+		Psest_4012	0.13	+0.8
4,189,584	+		Psest_4012	0.13	+0.7
4,189,585	-		Psest_4012	0.14	-0.5
4,189,585	-		Psest_4012	0.14	+0.3
4,189,585	-		Psest_4012	0.14	+0.5
4,189,585	-		Psest_4012	0.14	-1.4
4,189,585	-		Psest_4012	0.14	+0.6
4,189,585	-		Psest_4012	0.14	-0.0
4,189,585	-		Psest_4012	0.14	-0.3
4,189,585	-		Psest_4012	0.14	-0.4
4,189,585	-		Psest_4012	0.14	+0.9
4,189,585	-		Psest_4012	0.14	+0.0
4,189,585	-		Psest_4012	0.14	+1.4
4,189,585	-		Psest_4012	0.14	+0.2
4,189,585	-		Psest_4012	0.14	-0.1
4,189,585	-		Psest_4012	0.14	-0.0
4,189,585	-		Psest_4012	0.14	-2.4
4,189,688	+		Psest_4012	0.32	+0.6
4,189,688	+		Psest_4012	0.32	-0.6
4,189,688	+		Psest_4012	0.32	-0.6
4,189,688	+		Psest_4012	0.32	+0.7
4,189,689	-		Psest_4012	0.33	+1.0
4,189,689	-		Psest_4012	0.33	+1.1
4,189,766	+		Psest_4012	0.47	-0.1
4,189,868	+		Psest_4012	0.65	-0.1
4,189,868	+		Psest_4012	0.65	-0.0
4,189,868	+		Psest_4012	0.65	-0.1
4,189,868	+		Psest_4012	0.65	+1.7
4,189,868	+		Psest_4012	0.65	+0.9
4,189,868	+		Psest_4012	0.65	+0.3
4,189,868	+		Psest_4012	0.65	+0.4
4,189,869	-		Psest_4012	0.66	-1.3
4,189,869	-		Psest_4012	0.66	-0.6
4,189,869	-		Psest_4012	0.66	+0.3
4,189,876	+		Psest_4012	0.67	-0.6
4,189,877	-		Psest_4012	0.67	+0.7
4,189,877	-		Psest_4012	0.67	+1.3
4,189,921	+		Psest_4012	0.75	-0.3
4,189,921	+		Psest_4012	0.75	+0.9
4,189,921	+		Psest_4012	0.75	-2.4
4,189,922	-		Psest_4012	0.75	+0.4
4,189,922	-		Psest_4012	0.75	+0.1
4,189,922	-		Psest_4012	0.75	-0.8
4,189,922	-		Psest_4012	0.75	-0.7
4,189,922	-		Psest_4012	0.75	-0.8
4,189,922	-		Psest_4012	0.75	+0.7
4,189,922	-		Psest_4012	0.75	-0.2
4,189,922	-		Psest_4012	0.75	+0.7
4,189,922	-		Psest_4012	0.75	+0.2
4,189,922	-		Psest_4012	0.75	-0.1
4,189,931	+		Psest_4012	0.77	-1.1
4,189,931	+		Psest_4012	0.77	+0.7
4,190,109	+				-0.7
4,190,191	-		Psest_4013	0.10	-0.2
4,190,420	-		Psest_4013	0.27	-0.8
4,190,679	+		Psest_4013	0.46	+1.0
4,190,679	+		Psest_4013	0.46	+1.4
4,190,679	+		Psest_4013	0.46	+0.0
4,190,679	+		Psest_4013	0.46	-0.7
4,190,679	+		Psest_4013	0.46	+0.2
4,190,679	+		Psest_4013	0.46	+0.2
4,190,679	+		Psest_4013	0.46	-1.0
4,190,679	+		Psest_4013	0.46	-0.4
4,190,679	+		Psest_4013	0.46	-2.3
4,190,679	+		Psest_4013	0.46	+0.2
4,190,679	+		Psest_4013	0.46	-3.7
4,190,680	-		Psest_4013	0.46	-0.7
4,190,680	-		Psest_4013	0.46	-2.5
4,190,680	-		Psest_4013	0.46	-0.5
4,190,680	-		Psest_4013	0.46	+1.3
4,190,680	-		Psest_4013	0.46	+0.4
4,190,680	-		Psest_4013	0.46	-0.5
4,190,680	-		Psest_4013	0.46	+1.1
4,190,689	-		Psest_4013	0.46	-1.9
4,190,689	-		Psest_4013	0.46	-0.4
4,191,073	+		Psest_4013	0.74	+0.3
4,191,273	+		Psest_4013	0.89	+0.3
4,191,273	+		Psest_4013	0.89	+0.4
4,191,287	+		Psest_4013	0.90	+0.7
4,191,301	+				-3.0
4,191,318	+				-1.6
4,191,318	+				+1.7
4,191,318	+				+0.4
4,191,318	+				+0.2
4,191,318	+				+1.0
4,191,318	+				+0.6
4,191,318	+				+0.8
4,191,318	+				+2.5
4,191,318	+				-0.4
4,191,318	+				+1.2
4,191,318	+				+0.4
4,191,318	+				-2.9
4,191,318	+				+1.3
4,191,319	-				-0.0
4,191,319	-				-0.3
4,191,319	-				-0.8
4,191,319	-				-0.6
4,191,319	-				-0.2
4,191,319	-				-1.4
4,191,319	-				-0.5
4,191,319	-				-1.4
4,191,319	-				+0.3
4,191,319	-				-1.0
4,191,319	-				-1.6
4,191,319	-				+0.0
4,191,372	+				+2.2
4,191,372	+				+0.5
4,191,372	+				+1.0
4,191,372	+				+0.8
4,191,372	+				+0.3
4,191,372	+				+1.2
4,191,372	+				+1.2
4,191,372	+				+0.8
4,191,372	+				-0.5
4,191,372	+				+0.0
4,191,372	+				+0.5
4,191,372	+				+1.5
4,191,372	+				+1.1
4,191,372	+				-1.4
4,191,372	+				+1.0
4,191,372	+				+1.2
4,191,372	+				+0.9
4,191,373	-				+0.1
4,191,373	-				+0.0
4,191,373	-				-0.5
4,191,373	-				-0.9
4,191,373	-				-2.2
4,191,373	-				-1.0
4,191,373	-				-0.4
4,191,373	-				+1.5
4,191,373	-				+0.6
4,191,373	-				-1.8
4,191,373	-				-0.7
4,191,373	-				+0.0
4,191,373	-				-1.3
4,191,373	-				-0.5
4,191,373	-				-0.3
4,191,423	+				+0.9
4,191,423	+				+1.1
4,191,423	+				+0.4
4,191,423	+				+0.8
4,191,423	+				+1.0
4,191,423	+				+1.0
4,191,423	+				+0.5
4,191,423	+				+1.3
4,191,424	-				-0.1
4,191,424	-				+0.2
4,191,424	-				-0.3
4,191,424	-				-1.3
4,191,424	-				-0.3
4,191,424	-				-0.3
4,191,424	-				-0.9
4,191,588	-				-0.0
4,192,095	+		Psest_4014	0.49	-1.3
4,192,109	+		Psest_4014	0.50	+0.2
4,192,109	+		Psest_4014	0.50	+2.1
4,192,110	-		Psest_4014	0.50	+0.4
4,192,110	-		Psest_4014	0.50	+1.9
4,192,139	+		Psest_4014	0.52	+1.0
4,192,195	+		Psest_4014	0.57	+0.9
4,192,195	+		Psest_4014	0.57	-0.2
4,192,195	+		Psest_4014	0.57	+0.2
4,192,196	-		Psest_4014	0.57	+0.2
4,192,196	-		Psest_4014	0.57	+0.4
4,192,196	-		Psest_4014	0.57	+1.0
4,192,196	-		Psest_4014	0.57	+0.6
4,192,219	+		Psest_4014	0.59	-0.6
4,192,219	+		Psest_4014	0.59	+0.1
4,192,219	+		Psest_4014	0.59	-0.3
4,192,219	+		Psest_4014	0.59	+0.9
4,192,220	-		Psest_4014	0.59	-1.2
4,192,220	-		Psest_4014	0.59	-0.8
4,192,220	-		Psest_4014	0.59	+0.4
4,192,220	-		Psest_4014	0.59	+0.1