Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3758

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,925,928	+				-0.0
3,925,946	+				-0.6
3,925,946	+				-0.3
3,925,946	+				-1.1
3,925,946	+				-0.0
3,925,946	+				-1.0
3,925,946	+				-2.1
3,925,947	-				+0.0
3,925,947	-				-1.1
3,925,947	-				+0.7
3,925,947	-				-0.2
3,925,947	-				-1.4
3,925,947	-				+0.3
3,925,947	-				-1.6
3,925,947	-				+0.3
3,925,947	-				+0.0
3,925,947	-				-1.8
3,925,947	-				+0.6
3,925,947	-				-0.2
3,925,961	-				-0.5
3,925,974	+				+0.1
3,925,974	+				-0.8
3,925,974	+				-0.7
3,925,975	-				+0.4
3,925,975	-				+0.0
3,925,975	-				+0.3
3,925,975	-				-0.8
3,925,975	-				-0.6
3,926,001	+				+0.0
3,926,001	+				-1.3
3,926,001	+				-1.6
3,926,001	+				-0.9
3,926,002	-				-1.0
3,926,002	-				+0.5
3,926,002	-				-2.3
3,926,002	-				-0.0
3,926,002	-				+0.6
3,926,002	-				-2.1
3,926,002	-				-0.1
3,926,002	-				-2.3
3,926,002	-				+1.1
3,926,110	+		Psest_3756	0.23	-0.0
3,926,111	-		Psest_3756	0.24	-0.4
3,926,111	-		Psest_3756	0.24	-1.3
3,926,111	-		Psest_3756	0.24	+1.0
3,926,483	+				-0.6
3,926,483	+				+0.1
3,926,483	+				-0.0
3,926,483	+				-2.7
3,926,483	+				-1.1
3,926,483	+				+2.4
3,926,483	+				+0.4
3,926,483	+				-0.6
3,926,483	+				+0.6
3,926,483	+				-0.9
3,926,483	+				-0.9
3,926,483	+				-0.2
3,926,484	-				+0.3
3,926,484	-				-0.6
3,926,484	-				-0.8
3,926,484	-				+0.2
3,926,484	-				+1.7
3,926,484	-				+0.1
3,926,534	+				+0.1
3,926,534	+				-0.0
3,926,534	+				+0.1
3,926,534	+				-1.2
3,926,535	-				+0.4
3,926,535	-				-0.4
3,926,565	+		Psest_3757	0.15	-0.6
3,926,565	+		Psest_3757	0.15	-0.5
3,926,565	+		Psest_3757	0.15	-0.8
3,926,565	+		Psest_3757	0.15	+0.6
3,926,565	+		Psest_3757	0.15	-0.2
3,926,566	-		Psest_3757	0.15	-0.1
3,926,566	-		Psest_3757	0.15	+0.4
3,926,694	-		Psest_3757	0.67	-0.6
3,926,786	+				-0.6
3,927,498	+		Psest_3758	0.21	-1.1
3,927,499	-		Psest_3758	0.21	+0.5
3,927,499	-		Psest_3758	0.21	+1.0
3,927,499	-		Psest_3758	0.21	+0.1
3,927,499	-		Psest_3758	0.21	-2.0
3,927,499	-		Psest_3758	0.21	+1.2
3,927,600	+		Psest_3758	0.24	-0.0
3,927,600	+		Psest_3758	0.24	-0.0
3,927,600	+		Psest_3758	0.24	-2.1
3,927,600	+		Psest_3758	0.24	+0.7
3,927,600	+		Psest_3758	0.24	+0.2
3,927,601	-		Psest_3758	0.24	+0.3
3,927,601	-		Psest_3758	0.24	+0.9
3,927,601	-		Psest_3758	0.24	+0.4
3,927,601	-		Psest_3758	0.24	+0.7
3,927,714	+		Psest_3758	0.28	+0.1
3,927,714	+		Psest_3758	0.28	+1.0
3,927,714	+		Psest_3758	0.28	-0.4
3,927,714	+		Psest_3758	0.28	-0.0
3,927,715	-		Psest_3758	0.28	-0.2
3,927,715	-		Psest_3758	0.28	-1.8
3,927,735	+		Psest_3758	0.29	-1.1
3,927,735	+		Psest_3758	0.29	-2.3
3,927,736	-		Psest_3758	0.29	-1.0
3,927,758	-		Psest_3758	0.30	-0.0
3,927,771	+		Psest_3758	0.30	-0.9
3,927,771	+		Psest_3758	0.30	-0.7
3,927,771	+		Psest_3758	0.30	-1.0
3,927,771	+		Psest_3758	0.30	-0.6
3,927,771	+		Psest_3758	0.30	-2.6
3,927,771	+		Psest_3758	0.30	-0.5
3,927,771	+		Psest_3758	0.30	+1.6
3,927,771	+		Psest_3758	0.30	-0.6
3,927,771	+		Psest_3758	0.30	-2.9
3,927,771	+		Psest_3758	0.30	-3.9
3,927,771	+		Psest_3758	0.30	+0.8
3,927,771	+		Psest_3758	0.30	-0.5
3,927,771	+		Psest_3758	0.30	+0.5
3,927,771	+		Psest_3758	0.30	-0.5
3,927,772	-		Psest_3758	0.30	-1.0
3,927,772	-		Psest_3758	0.30	+0.2
3,927,772	-		Psest_3758	0.30	+0.6
3,927,772	-		Psest_3758	0.30	-0.9
3,927,772	-		Psest_3758	0.30	+0.6
3,927,772	-		Psest_3758	0.30	-0.2
3,927,772	-		Psest_3758	0.30	+0.5
3,927,772	-		Psest_3758	0.30	+0.2
3,927,772	-		Psest_3758	0.30	-1.2
3,927,772	-		Psest_3758	0.30	-0.6
3,927,772	-		Psest_3758	0.30	+0.1
3,927,825	-		Psest_3758	0.32	-0.4
3,927,825	-		Psest_3758	0.32	-0.5
3,927,825	-		Psest_3758	0.32	-0.8
3,927,828	+		Psest_3758	0.32	-0.5
3,927,828	+		Psest_3758	0.32	-2.4
3,927,828	+		Psest_3758	0.32	-2.0
3,927,828	+		Psest_3758	0.32	-0.7
3,927,828	+		Psest_3758	0.32	-0.1
3,927,828	+		Psest_3758	0.32	-0.0
3,927,828	+		Psest_3758	0.32	-0.2
3,927,828	+		Psest_3758	0.32	-1.1
3,927,828	+		Psest_3758	0.32	+0.2
3,927,828	+		Psest_3758	0.32	-0.0
3,927,828	+		Psest_3758	0.32	-2.5
3,927,828	+		Psest_3758	0.32	-1.1
3,927,828	+		Psest_3758	0.32	+0.1
3,927,829	-		Psest_3758	0.32	-0.2
3,927,829	-		Psest_3758	0.32	-0.9
3,927,829	-		Psest_3758	0.32	-0.5
3,927,829	-		Psest_3758	0.32	-0.8
3,927,829	-		Psest_3758	0.32	-0.1
3,927,829	-		Psest_3758	0.32	-0.4
3,927,829	-		Psest_3758	0.32	-0.2
3,927,829	-		Psest_3758	0.32	+0.0
3,927,829	-		Psest_3758	0.32	-0.8
3,927,829	-		Psest_3758	0.32	-0.3
3,927,829	-		Psest_3758	0.32	-0.3
3,927,829	-		Psest_3758	0.32	+0.2
3,927,829	-		Psest_3758	0.32	-0.4
3,927,829	-		Psest_3758	0.32	+0.2
3,927,864	+		Psest_3758	0.34	-0.2
3,927,864	+		Psest_3758	0.34	-0.8
3,927,864	+		Psest_3758	0.34	+0.2
3,927,864	+		Psest_3758	0.34	-0.4
3,927,864	+		Psest_3758	0.34	-0.8
3,927,864	+		Psest_3758	0.34	-1.0
3,927,864	+		Psest_3758	0.34	-0.4
3,927,864	+		Psest_3758	0.34	-0.1
3,927,864	+		Psest_3758	0.34	-1.3
3,927,865	-		Psest_3758	0.34	-0.7
3,927,865	-		Psest_3758	0.34	-2.9
3,927,865	-		Psest_3758	0.34	+0.1
3,927,865	-		Psest_3758	0.34	+0.7
3,927,865	-		Psest_3758	0.34	+2.6
3,927,865	-		Psest_3758	0.34	-1.5
3,927,865	-		Psest_3758	0.34	-0.1
3,927,865	-		Psest_3758	0.34	-0.7
3,927,865	-		Psest_3758	0.34	-0.8
3,927,865	-		Psest_3758	0.34	+1.4
3,927,866	+		Psest_3758	0.34	-0.9
3,927,867	-		Psest_3758	0.34	-0.6
3,927,867	-		Psest_3758	0.34	-0.4
3,927,876	+		Psest_3758	0.34	-0.5
3,928,140	+		Psest_3758	0.43	-0.5
3,928,140	+		Psest_3758	0.43	-0.3
3,928,140	+		Psest_3758	0.43	-2.5
3,928,140	+		Psest_3758	0.43	-0.8
3,928,140	+		Psest_3758	0.43	+0.5
3,928,140	+		Psest_3758	0.43	+2.0
3,928,140	+		Psest_3758	0.43	-0.4
3,928,141	-		Psest_3758	0.43	-0.1
3,928,141	-		Psest_3758	0.43	+0.2
3,928,141	-		Psest_3758	0.43	-1.9
3,928,141	-		Psest_3758	0.43	-0.4
3,928,141	-		Psest_3758	0.43	-2.2
3,928,141	-		Psest_3758	0.43	-0.6
3,928,141	-		Psest_3758	0.43	-2.5
3,928,141	-		Psest_3758	0.43	+1.0
3,928,141	-		Psest_3758	0.43	-0.4
3,928,147	-		Psest_3758	0.44	+0.4
3,928,216	+		Psest_3758	0.46	+0.4
3,928,330	-		Psest_3758	0.50	-2.3
3,928,330	-		Psest_3758	0.50	+0.7
3,929,085	+		Psest_3758	0.77	+0.3
3,929,085	+		Psest_3758	0.77	+2.6
3,929,086	-		Psest_3758	0.77	-1.6
3,929,223	+		Psest_3758	0.82	+0.1
3,929,223	+		Psest_3758	0.82	-1.8
3,929,223	+		Psest_3758	0.82	+0.0
3,929,223	+		Psest_3758	0.82	-1.6
3,929,224	-		Psest_3758	0.82	+0.2
3,929,224	-		Psest_3758	0.82	+0.4
3,929,374	-		Psest_3758	0.87	-0.0
3,929,457	+				+1.3
3,929,457	+				+0.1
3,929,457	+				+0.3
3,929,457	+				+1.2
3,929,457	+				-0.7
3,929,457	+				-0.2
3,929,457	+				-1.8
3,929,457	+				-0.8
3,929,458	-				+0.8
3,929,458	-				-0.4
3,929,458	-				+0.2
3,929,458	-				+0.6
3,929,458	-				-0.1
3,929,458	-				+1.2
3,929,458	-				+1.4
3,929,458	-				+0.8
3,929,458	-				+1.1
3,929,515	-				+0.4
3,929,520	-				-0.5
3,929,547	+				-0.6
3,929,622	+				-1.2
3,929,622	+				-0.3
3,929,622	+				-0.3
3,929,622	+				-1.8
3,929,622	+				+1.0
3,929,622	+				-0.9
3,929,623	-				+0.0
3,929,623	-				+0.9
3,929,623	-				-0.4
3,929,623	-				+0.2
3,929,623	-				-0.9
3,929,623	-				-0.0
3,929,623	-				+1.2
3,929,623	-				-0.7
3,929,623	-				-1.3
3,929,623	-				+0.2
3,929,623	-				+0.3
3,929,623	-				+0.6
3,929,623	-				+0.2
3,929,682	+				-0.0
3,929,737	-				+0.8
3,929,737	-				-0.0
3,929,744	-				-1.3
3,929,744	-				+0.1
3,929,745	+				+0.4
3,929,745	+				+0.0
3,929,745	+				+1.5
3,929,745	+				+0.2
3,929,745	+				+1.3
3,929,745	+				-0.8
3,929,745	+				-1.7
3,929,745	+				+0.7
3,929,745	+				+1.4
3,929,745	+				-0.1
3,929,745	+				+0.3
3,929,745	+				+0.6
3,929,745	+				-0.5
3,929,745	+				-2.0
3,929,745	+				+0.6
3,929,745	+				-1.0
3,929,745	+				-0.8
3,929,745	+				+0.4
3,929,745	+				-0.7
3,929,745	+				+0.0
3,929,746	-				-1.3
3,929,746	-				-0.5
3,929,746	-				-3.0
3,929,746	-				-0.7
3,929,746	-				-0.2
3,929,746	-				-0.3
3,929,746	-				+0.4
3,929,746	-				-1.8
3,929,746	-				-0.1
3,929,746	-				+0.1
3,929,746	-				+0.8
3,929,746	-				+0.4
3,929,746	-				-1.8
3,929,746	-				-1.8
3,929,746	-				+0.7
3,929,746	-				-0.6
3,929,746	-				+0.1
3,929,876	-		Psest_3759	0.11	-0.9
3,929,876	-		Psest_3759	0.11	-1.7
3,929,876	-		Psest_3759	0.11	-0.3
3,929,876	-		Psest_3759	0.11	-0.7
3,929,876	-		Psest_3759	0.11	-1.1
3,930,001	-		Psest_3759	0.38	+0.4
3,930,001	-		Psest_3759	0.38	-1.3
3,930,074	+		Psest_3759	0.53	+0.5
3,930,074	+		Psest_3759	0.53	+1.0
3,930,074	+		Psest_3759	0.53	+1.9
3,930,074	+		Psest_3759	0.53	+0.3
3,930,074	+		Psest_3759	0.53	-0.8
3,930,074	+		Psest_3759	0.53	+0.3
3,930,075	-		Psest_3759	0.54	-0.3
3,930,075	-		Psest_3759	0.54	-0.6
3,930,075	-		Psest_3759	0.54	-1.3
3,930,075	-		Psest_3759	0.54	-1.3
3,930,075	-		Psest_3759	0.54	-0.2
3,930,075	-		Psest_3759	0.54	-0.9
3,930,075	-		Psest_3759	0.54	-0.5
3,930,075	-		Psest_3759	0.54	-0.9
3,930,075	-		Psest_3759	0.54	+0.6
3,930,075	-		Psest_3759	0.54	+0.1
3,930,075	-		Psest_3759	0.54	-0.7
3,930,075	-		Psest_3759	0.54	-1.1
3,930,075	-		Psest_3759	0.54	-2.2
3,930,174	+		Psest_3759	0.75	-0.5
3,930,289	+				+1.5
3,930,290	-				-0.7
3,930,309	+				+0.2
3,930,310	-				-0.5
3,930,331	+				+0.9
3,930,332	-				-0.9
3,930,381	+				+1.1
3,930,381	+				-1.5
3,930,455	+				+0.1
3,930,455	+				-1.0
3,930,455	+				+0.6
3,930,456	-				-0.1
3,930,456	-				-1.3
3,930,456	-				-0.4
3,930,488	+				+0.4
3,930,488	+				+0.2
3,930,489	-				-0.1
3,930,666	+				+0.9