Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3373

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,540,270	-				-0.6
3,540,270	-				-1.3
3,540,301	+		Psest_3372	0.11	-0.1
3,540,301	+		Psest_3372	0.11	+0.8
3,540,301	+		Psest_3372	0.11	-0.9
3,540,301	+		Psest_3372	0.11	-0.9
3,540,301	+		Psest_3372	0.11	-0.8
3,540,302	-		Psest_3372	0.12	-0.6
3,540,302	-		Psest_3372	0.12	+0.2
3,540,312	+		Psest_3372	0.12	-1.2
3,540,313	-		Psest_3372	0.13	-0.8
3,540,463	+		Psest_3372	0.27	-1.0
3,540,464	-		Psest_3372	0.27	+0.0
3,540,566	-		Psest_3372	0.36	+1.6
3,540,566	-		Psest_3372	0.36	+0.7
3,540,566	-		Psest_3372	0.36	-1.4
3,540,645	+		Psest_3372	0.43	-1.3
3,540,653	-		Psest_3372	0.44	+0.0
3,540,794	-		Psest_3372	0.57	-2.8
3,540,804	+		Psest_3372	0.58	-1.0
3,540,836	-		Psest_3372	0.61	-0.7
3,540,836	-		Psest_3372	0.61	-1.2
3,540,836	-		Psest_3372	0.61	+0.0
3,540,836	-		Psest_3372	0.61	+1.6
3,540,836	-		Psest_3372	0.61	-1.2
3,540,985	+		Psest_3372	0.75	-1.8
3,540,986	-		Psest_3372	0.75	+1.2
3,540,989	+		Psest_3372	0.76	-0.7
3,540,990	-		Psest_3372	0.76	-0.4
3,540,990	-		Psest_3372	0.76	-1.5
3,541,011	-		Psest_3372	0.78	-1.5
3,541,038	+		Psest_3372	0.80	-0.0
3,541,162	+				-1.0
3,541,310	+		Psest_3373	0.12	-2.0
3,541,311	-		Psest_3373	0.12	-1.9
3,541,581	+		Psest_3373	0.62	-0.7
3,541,581	+		Psest_3373	0.62	-1.9
3,541,581	+		Psest_3373	0.62	-1.6
3,541,581	+		Psest_3373	0.62	-0.6
3,541,582	-		Psest_3373	0.63	-2.9
3,541,699	+		Psest_3373	0.84	-0.1
3,541,700	-		Psest_3373	0.85	-1.4
3,541,700	-		Psest_3373	0.85	+0.5
3,541,731	-				-0.1
3,541,764	+				-0.9
3,541,765	-				-0.2
3,541,847	+				-0.7
3,541,920	-				+2.0
3,541,940	+				-0.0
3,542,011	+				-1.1
3,542,030	-				-2.8
3,542,128	+				-0.4
3,542,129	-				-0.2
3,542,134	-				-1.4
3,542,292	+		Psest_3374	0.13	-1.4
3,542,292	+		Psest_3374	0.13	-1.8
3,542,292	+		Psest_3374	0.13	-2.0
3,542,330	-		Psest_3374	0.14	-1.4
3,542,330	-		Psest_3374	0.14	-0.6
3,542,447	+		Psest_3374	0.18	-2.0
3,542,458	+		Psest_3374	0.18	-3.2
3,542,458	+		Psest_3374	0.18	-0.6
3,542,532	-		Psest_3374	0.20	-0.4
3,542,551	+		Psest_3374	0.20	-1.8
3,542,626	+		Psest_3374	0.22	-1.7
3,542,653	-		Psest_3374	0.23	-0.8
3,542,684	-		Psest_3374	0.24	+0.1