Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3224

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,396,867	+				+0.9
3,396,867	+				+1.5
3,396,867	+				-1.0
3,396,867	+				+1.7
3,396,867	+				+0.2
3,396,867	+				+0.9
3,396,868	-				+2.1
3,396,868	-				-0.0
3,396,868	-				+0.9
3,396,868	-				+1.7
3,396,868	-				-0.5
3,396,868	-				+1.8
3,396,868	-				+1.8
3,396,868	-				+1.3
3,396,868	-				+1.4
3,396,917	+				+0.9
3,396,917	+				+2.0
3,396,917	+				+0.4
3,396,918	-				-0.2
3,396,953	+				+1.7
3,397,147	+		Psest_3224	0.25	+1.1
3,397,147	+		Psest_3224	0.25	+1.1
3,397,147	+		Psest_3224	0.25	+0.9
3,397,147	+		Psest_3224	0.25	+0.1
3,397,147	+		Psest_3224	0.25	+1.7
3,397,148	-		Psest_3224	0.25	+0.7
3,397,148	-		Psest_3224	0.25	+0.8
3,397,151	+		Psest_3224	0.25	+0.2
3,397,151	+		Psest_3224	0.25	+0.3
3,397,151	+		Psest_3224	0.25	+0.1
3,397,151	+		Psest_3224	0.25	+0.9
3,397,151	+		Psest_3224	0.25	+0.3
3,397,151	+		Psest_3224	0.25	-0.0
3,397,151	+		Psest_3224	0.25	+0.4
3,397,151	+		Psest_3224	0.25	+1.4
3,397,151	+		Psest_3224	0.25	+0.8
3,397,151	+		Psest_3224	0.25	+0.6
3,397,151	+		Psest_3224	0.25	+1.2
3,397,151	+		Psest_3224	0.25	-1.4
3,397,152	-		Psest_3224	0.25	+1.5
3,397,152	-		Psest_3224	0.25	+0.7
3,397,152	-		Psest_3224	0.25	+0.5
3,397,152	-		Psest_3224	0.25	+0.8
3,397,152	-		Psest_3224	0.25	-0.2
3,397,193	-		Psest_3224	0.30	-0.4
3,397,407	-		Psest_3224	0.51	+1.2
3,397,445	+		Psest_3224	0.55	+0.3
3,397,445	+		Psest_3224	0.55	+0.7
3,397,445	+		Psest_3224	0.55	+0.3
3,397,466	+		Psest_3224	0.57	+0.3
3,397,466	+		Psest_3224	0.57	+0.7
3,397,467	-		Psest_3224	0.57	+0.5
3,397,467	-		Psest_3224	0.57	-1.7
3,397,467	-		Psest_3224	0.57	+1.7
3,397,717	+		Psest_3224	0.82	+1.8
3,397,717	+		Psest_3224	0.82	+0.4
3,397,778	+		Psest_3224	0.88	+0.7
3,397,778	+		Psest_3224	0.88	+1.2
3,397,779	-		Psest_3224	0.88	-0.0
3,397,779	-		Psest_3224	0.88	+0.8
3,397,779	-		Psest_3224	0.88	+0.9
3,397,877	-				+1.1
3,398,004	+				+1.4
3,398,004	+				-0.3
3,398,004	+				-0.2
3,398,004	+				-0.4
3,398,004	+				+0.2
3,398,004	+				-1.0
3,398,004	+				-1.5
3,398,004	+				-2.0
3,398,004	+				-0.8
3,398,004	+				-1.0
3,398,005	-				-1.7
3,398,005	-				-0.5
3,398,005	-				+0.5
3,398,005	-				-0.5
3,398,005	-				+0.0
3,398,005	-				-2.1
3,398,005	-				+0.2
3,398,005	-				+0.4
3,398,005	-				-1.3
3,398,005	-				+0.6
3,398,087	+				-1.5
3,398,087	+				-1.3
3,398,087	+				-1.5
3,398,087	+				+0.8
3,398,087	+				-1.3
3,398,087	+				-0.6
3,398,087	+				-0.1
3,398,087	+				+1.0
3,398,088	-				+0.1
3,398,088	-				+0.7
3,398,088	-				+0.2
3,398,088	-				-2.3
3,398,088	-				-0.5
3,398,088	-				-1.5
3,398,088	-				-0.4
3,398,088	-				+1.5
3,398,088	-				-0.1
3,398,088	-				+0.5
3,398,088	-				+0.5
3,398,144	+				-0.6
3,398,183	+				-0.4
3,398,183	+				-1.6
3,398,183	+				-0.3
3,398,184	-				+0.9
3,398,278	-		Psest_3226	0.20	-1.1
3,398,781	-				-0.7
3,398,869	+				+0.4