Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3154

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,321,932	-				-1.2
3,322,140	+		Psest_3151	0.47	+0.1
3,322,141	-		Psest_3151	0.47	-1.2
3,322,143	-		Psest_3151	0.48	-0.8
3,322,181	+		Psest_3151	0.56	-0.3
3,322,269	+		Psest_3151	0.75	-0.5
3,322,386	+				-1.6
3,323,145	-		Psest_3154	0.16	-0.5
3,323,206	-		Psest_3154	0.20	-0.2
3,323,239	+		Psest_3154	0.22	-2.2
3,323,375	+		Psest_3154	0.30	-0.1
3,323,375	+		Psest_3154	0.30	-1.0
3,323,375	+		Psest_3154	0.30	-0.4
3,323,376	-		Psest_3154	0.30	+0.6
3,323,376	-		Psest_3154	0.30	-2.4
3,323,376	-		Psest_3154	0.30	-3.0
3,323,376	-		Psest_3154	0.30	-1.4
3,323,435	+		Psest_3154	0.34	-2.3
3,323,521	-		Psest_3154	0.39	+0.5
3,323,616	+		Psest_3154	0.44	-0.2
3,323,616	+		Psest_3154	0.44	-0.7
3,323,675	-		Psest_3154	0.48	-0.7
3,323,675	-		Psest_3154	0.48	-2.3
3,323,699	+		Psest_3154	0.49	+0.1
3,323,700	-		Psest_3154	0.49	-1.0
3,323,780	-		Psest_3154	0.54	-1.6
3,323,826	+		Psest_3154	0.57	-3.7
3,323,826	+		Psest_3154	0.57	-0.8
3,323,826	+		Psest_3154	0.57	-1.4
3,323,884	-		Psest_3154	0.61	-1.7
3,323,973	+		Psest_3154	0.66	-2.0
3,324,013	+		Psest_3154	0.68	-0.7
3,324,014	-		Psest_3154	0.68	-0.8
3,324,014	-		Psest_3154	0.68	+0.1
3,324,014	-		Psest_3154	0.68	-0.6
3,324,071	-		Psest_3154	0.72	-0.7
3,324,071	-		Psest_3154	0.72	+0.6
3,324,071	-		Psest_3154	0.72	-0.3
3,324,071	-		Psest_3154	0.72	-1.0
3,324,071	-		Psest_3154	0.72	-1.6
3,324,071	-		Psest_3154	0.72	+1.1
3,324,071	-		Psest_3154	0.72	-0.3
3,324,073	-		Psest_3154	0.72	-0.4
3,324,228	-		Psest_3154	0.81	-3.0
3,324,375	-				-0.9
3,324,388	-				-1.9
3,324,426	+				+0.4
3,324,465	+				+0.2
3,324,465	+				-2.5
3,324,552	+				-2.2
3,324,552	+				-1.5
3,324,552	+				-2.2
3,324,552	+				-0.9
3,324,552	+				-2.0
3,324,552	+				-0.5
3,324,552	+				+0.4
3,324,552	+				+0.2
3,324,552	+				-2.6
3,324,552	+				-0.4
3,324,552	+				-1.6
3,324,553	-				-2.1
3,324,553	-				-2.2
3,324,553	-				-1.6
3,324,553	-				-0.2
3,324,553	-				+0.2
3,324,553	-				-0.2
3,324,553	-				-0.4
3,324,553	-				-0.5
3,324,553	-				-1.8
3,324,553	-				-2.0
3,324,553	-				-0.7
3,324,553	-				-1.5
3,324,554	+				-0.3
3,324,554	+				+0.1
3,324,554	+				+2.3
3,324,554	+				+0.2
3,324,554	+				-0.4
3,324,554	+				-0.2
3,324,554	+				+0.5
3,324,554	+				+0.7
3,324,554	+				-0.5
3,324,554	+				-0.6
3,324,554	+				-0.6
3,324,554	+				-1.9
3,324,554	+				+0.6
3,324,554	+				-0.7
3,324,554	+				-0.8
3,324,555	-				+1.6
3,324,555	-				-1.3
3,324,555	-				-0.8
3,324,555	-				-0.3
3,324,555	-				-2.2
3,324,555	-				-0.7
3,324,555	-				-3.1
3,324,555	-				-2.7
3,324,555	-				+0.6
3,324,555	-				-1.0
3,324,555	-				+1.6
3,324,555	-				-0.5
3,324,555	-				-0.7
3,324,555	-				+0.5
3,324,555	-				-1.7
3,324,806	+				+0.1
3,324,806	+				+0.2
3,324,806	+				+0.9
3,324,810	+				-0.8
3,324,810	+				-2.6
3,324,810	+				-2.9
3,324,810	+				-0.0
3,324,811	-				-0.6
3,324,812	+				-0.0
3,324,812	+				-1.2
3,324,812	+				+0.7
3,324,812	+				+1.8
3,324,867	-				-0.1
3,324,915	+				+0.7
3,324,916	-				-0.2
3,324,942	+				-0.2
3,324,942	+				+1.6
3,324,942	+				+0.6
3,324,942	+				+0.8
3,324,953	+				+0.2
3,324,995	+				-0.1
3,324,995	+				-0.4
3,325,151	-				+0.8
3,325,164	+				-0.1
3,325,334	+		Psest_3155	0.54	-0.0
3,325,334	+		Psest_3155	0.54	-1.1
3,325,335	-		Psest_3155	0.54	-0.7
3,325,335	-		Psest_3155	0.54	+0.1
3,325,335	-		Psest_3155	0.54	-0.9
3,325,537	+				-1.1