Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3122

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,298,515	-				-2.0
3,298,555	-				-3.0
3,298,555	-				-1.3
3,298,621	+				-0.9
3,298,621	+				+1.2
3,298,758	+		Psest_3122	0.22	+2.2
3,298,759	-		Psest_3122	0.22	+1.8
3,298,844	+		Psest_3122	0.32	+0.7
3,298,845	-		Psest_3122	0.32	+1.9
3,298,845	-		Psest_3122	0.32	+2.2
3,298,845	-		Psest_3122	0.32	+2.9
3,298,889	-		Psest_3122	0.37	+1.8
3,298,993	+		Psest_3122	0.48	+1.1
3,299,056	+		Psest_3122	0.55	+1.8
3,299,056	+		Psest_3122	0.55	+2.8
3,299,057	-		Psest_3122	0.55	+1.2
3,299,492	+				+1.3
3,299,492	+				-0.0
3,299,492	+				+1.1
3,299,493	-				-0.1
3,299,501	+				+0.3
3,299,501	+				+1.6
3,299,502	-				-0.7
3,299,502	-				+1.2
3,299,502	-				+0.5
3,299,502	-				+0.2
3,299,502	-				+1.0
3,299,502	-				+0.5
3,299,861	+		Psest_3123	0.22	-3.0
3,299,861	+		Psest_3123	0.22	+0.3
3,300,108	+		Psest_3123	0.45	-2.7
3,300,108	+		Psest_3123	0.45	-0.7
3,300,431	+		Psest_3123	0.76	-1.4
3,300,433	+		Psest_3123	0.77	-2.3
3,300,434	-		Psest_3123	0.77	-2.9
3,300,458	+		Psest_3123	0.79	-2.7
3,300,458	+		Psest_3123	0.79	-2.2
3,300,458	+		Psest_3123	0.79	-1.2
3,300,459	-		Psest_3123	0.79	-2.6