Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3105

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,282,781	+				-2.3
3,282,781	+				-0.4
3,282,782	-				-0.5
3,282,792	+				-1.1
3,282,837	+				-3.9
3,282,837	+				-0.2
3,282,837	+				-1.3
3,282,837	+				+0.1
3,282,837	+				-0.2
3,282,838	-				-1.0
3,282,838	-				+0.1
3,282,838	-				-2.4
3,282,838	-				+0.2
3,282,838	-				-1.1
3,282,838	-				-0.9
3,282,838	-				+0.7
3,282,838	-				-1.5
3,282,838	-				-0.6
3,283,116	+		Psest_3105	0.32	-1.3
3,283,116	+		Psest_3105	0.32	-0.4
3,283,116	+		Psest_3105	0.32	-2.0
3,283,117	-		Psest_3105	0.32	-0.7
3,283,117	-		Psest_3105	0.32	-0.8
3,283,117	-		Psest_3105	0.32	-0.3
3,283,117	-		Psest_3105	0.32	-3.2
3,283,117	-		Psest_3105	0.32	-2.8
3,283,117	-		Psest_3105	0.32	-2.6
3,283,117	-		Psest_3105	0.32	-0.6
3,283,201	+		Psest_3105	0.42	-1.4
3,283,202	-		Psest_3105	0.42	-1.5
3,283,254	+		Psest_3105	0.48	-0.9
3,283,329	+		Psest_3105	0.57	-2.1
3,283,330	-		Psest_3105	0.57	+0.2
3,283,467	+		Psest_3105	0.74	+0.4
3,283,467	+		Psest_3105	0.74	+0.2
3,283,468	-		Psest_3105	0.74	-2.0
3,283,468	-		Psest_3105	0.74	-2.6
3,283,503	+		Psest_3105	0.78	-1.0
3,283,531	+		Psest_3105	0.81	+0.4
3,283,539	+		Psest_3105	0.82	-0.3
3,283,539	+		Psest_3105	0.82	-1.9
3,283,540	-		Psest_3105	0.83	-0.4
3,283,540	-		Psest_3105	0.83	+0.3
3,283,540	-		Psest_3105	0.83	+0.8
3,283,540	-		Psest_3105	0.83	-0.2
3,283,540	-		Psest_3105	0.83	-2.8
3,283,540	-		Psest_3105	0.83	-2.1
3,283,540	-		Psest_3105	0.83	-0.9
3,283,540	-		Psest_3105	0.83	-1.3
3,283,540	-		Psest_3105	0.83	-1.3
3,283,540	-		Psest_3105	0.83	-0.7
3,283,683	+				-0.4
3,283,792	-				+1.0
3,283,919	-		Psest_3106	0.17	+0.3
3,284,039	-		Psest_3106	0.41	-1.0
3,284,067	+		Psest_3106	0.46	-2.9
3,284,171	+		Psest_3106	0.66	-1.6
3,284,172	-		Psest_3106	0.66	+0.5
3,284,172	-		Psest_3106	0.66	-0.2
3,284,216	+		Psest_3106	0.75	-0.7
3,284,217	-		Psest_3106	0.75	-0.2
3,284,225	+		Psest_3106	0.77	+0.7
3,284,225	+		Psest_3106	0.77	-0.1
3,284,225	+		Psest_3106	0.77	-0.9
3,284,225	+		Psest_3106	0.77	-1.5
3,284,226	-		Psest_3106	0.77	-0.3
3,284,226	-		Psest_3106	0.77	-0.9
3,284,502	+		Psest_3107	0.18	+2.0
3,284,503	-		Psest_3107	0.18	+1.2
3,284,503	-		Psest_3107	0.18	+0.1
3,284,572	-		Psest_3107	0.28	-0.1
3,284,682	-		Psest_3107	0.44	-0.8