Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2882

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,072,731	+				-0.3
3,072,732	-		Psest_2881	0.10	+0.6
3,072,747	+		Psest_2881	0.12	-0.4
3,072,747	+		Psest_2881	0.12	-1.0
3,072,748	-		Psest_2881	0.12	-1.1
3,072,748	-		Psest_2881	0.12	-0.9
3,072,753	+		Psest_2881	0.12	+0.3
3,072,754	-		Psest_2881	0.13	+0.2
3,072,754	-		Psest_2881	0.13	+1.2
3,072,754	-		Psest_2881	0.13	+0.6
3,072,754	-		Psest_2881	0.13	-0.7
3,072,802	-		Psest_2881	0.18	-0.5
3,072,818	+		Psest_2881	0.20	-1.4
3,072,819	-		Psest_2881	0.20	-1.8
3,072,819	-		Psest_2881	0.20	+0.4
3,072,822	+		Psest_2881	0.20	+0.2
3,072,822	+		Psest_2881	0.20	-1.1
3,072,822	+		Psest_2881	0.20	-0.8
3,072,822	+		Psest_2881	0.20	-0.7
3,072,822	+		Psest_2881	0.20	-0.6
3,072,822	+		Psest_2881	0.20	-0.1
3,072,822	+		Psest_2881	0.20	+0.8
3,072,822	+		Psest_2881	0.20	-1.4
3,072,822	+		Psest_2881	0.20	-1.1
3,072,822	+		Psest_2881	0.20	-1.6
3,072,823	-		Psest_2881	0.20	-0.7
3,072,823	-		Psest_2881	0.20	+0.3
3,072,823	-		Psest_2881	0.20	-1.3
3,072,823	-		Psest_2881	0.20	+0.8
3,072,823	-		Psest_2881	0.20	-0.4
3,072,823	-		Psest_2881	0.20	+1.5
3,072,823	-		Psest_2881	0.20	-0.1
3,072,823	-		Psest_2881	0.20	+0.6
3,072,823	-		Psest_2881	0.20	+0.7
3,072,823	-		Psest_2881	0.20	+1.7
3,072,849	-		Psest_2881	0.23	-0.7
3,072,854	+		Psest_2881	0.24	-0.8
3,072,854	+		Psest_2881	0.24	+0.1
3,072,854	+		Psest_2881	0.24	-2.0
3,072,921	+		Psest_2881	0.32	-0.5
3,072,922	-		Psest_2881	0.32	-1.1
3,072,922	-		Psest_2881	0.32	-0.8
3,072,922	-		Psest_2881	0.32	+0.2
3,072,922	-		Psest_2881	0.32	-0.7
3,072,922	-		Psest_2881	0.32	+0.3
3,072,922	-		Psest_2881	0.32	-0.4
3,072,924	+		Psest_2881	0.32	+0.2
3,072,925	-		Psest_2881	0.32	-0.6
3,072,925	-		Psest_2881	0.32	+1.4
3,072,925	-		Psest_2881	0.32	+0.7
3,073,090	+		Psest_2881	0.51	-1.0
3,073,101	+		Psest_2881	0.52	-0.0
3,073,101	+		Psest_2881	0.52	-0.1
3,073,101	+		Psest_2881	0.52	-2.4
3,073,102	-		Psest_2881	0.52	-1.3
3,073,102	-		Psest_2881	0.52	-0.9
3,073,102	-		Psest_2881	0.52	-0.6
3,073,102	-		Psest_2881	0.52	-0.5
3,073,156	-		Psest_2881	0.58	+1.3
3,073,222	+		Psest_2881	0.66	-2.6
3,073,235	+		Psest_2881	0.67	+2.4
3,073,236	-		Psest_2881	0.68	+0.2
3,073,431	+		Psest_2881	0.90	+0.6
3,073,431	+		Psest_2881	0.90	-1.4
3,073,431	+		Psest_2881	0.90	-1.0
3,073,431	+		Psest_2881	0.90	-1.1
3,073,432	-				-0.8
3,073,432	-				-0.6
3,073,432	-				-1.3
3,073,469	-				-1.6
3,073,484	-				+0.2
3,073,484	-				-0.5
3,073,484	-				-1.2
3,073,523	+				-2.4
3,073,523	+				-0.8
3,073,524	-				-1.7
3,073,539	+				-2.0
3,073,540	-				+1.0
3,073,540	-				+0.4
3,073,553	-				-0.9
3,073,591	+				-1.3
3,073,737	+				+1.2
3,073,737	+				-0.0
3,073,738	-				+1.2
3,073,738	-				-1.2
3,073,738	-				-0.4
3,073,738	-				+2.5
3,073,738	-				-2.9
3,073,743	+				-1.9
3,073,743	+				-1.8
3,073,744	-				-0.4
3,073,761	+		Psest_2882	0.15	-0.7
3,073,761	+		Psest_2882	0.15	-0.4
3,073,761	+		Psest_2882	0.15	-0.8
3,073,761	+		Psest_2882	0.15	-0.1
3,073,761	+		Psest_2882	0.15	-0.9
3,073,761	+		Psest_2882	0.15	+0.1
3,073,762	-		Psest_2882	0.16	-2.7
3,073,762	-		Psest_2882	0.16	-2.6
3,073,762	-		Psest_2882	0.16	-1.6
3,073,762	-		Psest_2882	0.16	-1.5
3,073,762	-		Psest_2882	0.16	-0.9
3,073,806	+		Psest_2882	0.35	-1.4
3,073,806	+		Psest_2882	0.35	-1.3
3,073,806	+		Psest_2882	0.35	-1.4
3,073,807	-		Psest_2882	0.35	-1.0
3,074,162	+				+0.4
3,074,163	-				-0.4
3,074,196	-				-2.4
3,074,279	+				-0.1
3,074,280	-				-1.1
3,074,327	+				+0.2
3,074,327	+				-0.1
3,074,327	+				-0.4
3,074,327	+				-1.0
3,074,328	-				-1.1
3,074,387	+				+0.2
3,074,500	+				+0.8
3,074,500	+				-1.1
3,074,500	+				-2.5
3,074,500	+				-1.6
3,074,500	+				+1.2
3,074,500	+				-0.8
3,074,501	-				-1.5
3,074,501	-				-0.1
3,074,501	-				-1.3
3,074,501	-				-0.5
3,074,501	-				-0.5
3,074,501	-				-1.8
3,074,501	-				+0.3
3,074,501	-				-1.9
3,074,504	+		Psest_2883	0.10	-2.1
3,074,504	+		Psest_2883	0.10	+0.8
3,074,504	+		Psest_2883	0.10	+0.8
3,074,505	-		Psest_2883	0.10	-0.1
3,074,505	-		Psest_2883	0.10	+0.6
3,074,536	+		Psest_2883	0.12	-0.1
3,074,537	-		Psest_2883	0.12	-1.1
3,074,537	-		Psest_2883	0.12	+0.8
3,074,537	-		Psest_2883	0.12	-0.4
3,074,537	-		Psest_2883	0.12	-0.7
3,074,537	-		Psest_2883	0.12	-1.0
3,074,537	-		Psest_2883	0.12	+0.6
3,074,620	+		Psest_2883	0.18	-1.8
3,074,620	+		Psest_2883	0.18	-1.1
3,074,620	+		Psest_2883	0.18	-1.1
3,074,621	-		Psest_2883	0.18	-2.2
3,074,623	+		Psest_2883	0.18	-1.1
3,074,623	+		Psest_2883	0.18	-2.4
3,074,624	-		Psest_2883	0.18	+0.1
3,074,624	-		Psest_2883	0.18	-0.5
3,074,624	-		Psest_2883	0.18	-0.8
3,074,624	-		Psest_2883	0.18	-0.9
3,074,624	-		Psest_2883	0.18	+1.6
3,074,624	-		Psest_2883	0.18	-0.8
3,074,629	+		Psest_2883	0.18	-0.8
3,074,629	+		Psest_2883	0.18	-1.0
3,074,630	-		Psest_2883	0.18	-1.4
3,074,630	-		Psest_2883	0.18	+0.8
3,074,791	+		Psest_2883	0.29	+0.2
3,074,791	+		Psest_2883	0.29	+0.6
3,074,791	+		Psest_2883	0.29	-0.3
3,074,791	+		Psest_2883	0.29	-0.9
3,074,791	+		Psest_2883	0.29	-0.5
3,074,791	+		Psest_2883	0.29	-1.8
3,074,792	-		Psest_2883	0.29	+0.5
3,074,792	-		Psest_2883	0.29	-1.1
3,074,792	-		Psest_2883	0.29	-1.4
3,074,951	+		Psest_2883	0.39	+1.2
3,074,951	+		Psest_2883	0.39	+1.2
3,074,951	+		Psest_2883	0.39	-1.4
3,074,951	+		Psest_2883	0.39	+0.9
3,074,952	-		Psest_2883	0.39	+1.2
3,074,952	-		Psest_2883	0.39	-1.1