Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2815

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
3,002,180	+		Psest_2814	0.28	-2.1
3,002,195	+		Psest_2814	0.29	-0.6
3,002,195	+		Psest_2814	0.29	+0.5
3,002,195	+		Psest_2814	0.29	-0.2
3,002,195	+		Psest_2814	0.29	-0.8
3,002,195	+		Psest_2814	0.29	-2.6
3,002,196	-		Psest_2814	0.29	+0.0
3,002,218	+		Psest_2814	0.31	-0.1
3,002,218	+		Psest_2814	0.31	+0.5
3,002,219	-		Psest_2814	0.31	+0.0
3,002,219	-		Psest_2814	0.31	+0.2
3,002,219	-		Psest_2814	0.31	-1.1
3,002,219	-		Psest_2814	0.31	+0.1
3,002,300	-		Psest_2814	0.39	+1.0
3,002,353	+		Psest_2814	0.44	-0.2
3,002,422	+		Psest_2814	0.51	-0.4
3,002,561	+		Psest_2814	0.64	+0.3
3,002,626	+		Psest_2814	0.70	+0.5
3,002,627	-		Psest_2814	0.70	+0.6
3,002,665	-		Psest_2814	0.74	-0.3
3,002,734	+		Psest_2814	0.80	+0.0
3,002,734	+		Psest_2814	0.80	+0.4
3,002,734	+		Psest_2814	0.80	+0.9
3,002,734	+		Psest_2814	0.80	+0.3
3,002,734	+		Psest_2814	0.80	-1.0
3,002,734	+		Psest_2814	0.80	-0.9
3,002,735	-		Psest_2814	0.80	-0.6
3,002,735	-		Psest_2814	0.80	-0.3
3,002,735	-		Psest_2814	0.80	-0.8
3,002,822	-		Psest_2814	0.89	+0.5
3,002,896	+				-0.2
3,002,896	+				+0.4
3,002,896	+				-2.5
3,002,896	+				-0.4
3,002,938	+				+1.4
3,002,938	+				+0.5
3,002,939	-				+0.7
3,003,001	+				+1.2
3,003,001	+				+0.4
3,003,001	+				-0.8
3,003,001	+				+0.1
3,003,002	-				+1.0
3,003,002	-				-1.4
3,003,157	+				+0.5
3,003,174	+				-1.8
3,003,174	+				-0.3
3,003,174	+				+1.2
3,003,174	+				-1.3
3,003,174	+				-0.2
3,003,175	-				+1.9
3,003,177	+				+0.5
3,003,177	+				-1.2
3,003,177	+				-1.8
3,003,177	+				+0.2
3,003,177	+				-0.9
3,003,177	+				+0.4
3,003,177	+				-0.7
3,003,177	+				-0.0
3,003,177	+				-0.3
3,003,177	+				-1.2
3,003,177	+				-1.0
3,003,178	-				+0.8
3,003,178	-				+0.8
3,003,178	-				+0.5
3,003,178	-				+1.1
3,003,178	-				-1.2
3,003,178	-				-0.3
3,003,178	-				+1.0
3,003,178	-				+0.5
3,003,385	-		Psest_2815	0.32	-0.0
3,003,455	+		Psest_2815	0.40	-0.6
3,003,455	+		Psest_2815	0.40	-0.8
3,003,456	-		Psest_2815	0.41	+0.4
3,003,456	-		Psest_2815	0.41	+0.7
3,003,456	-		Psest_2815	0.41	-3.2
3,003,585	+		Psest_2815	0.56	-0.3
3,003,585	+		Psest_2815	0.56	+0.6
3,003,591	+		Psest_2815	0.57	+0.1
3,003,591	+		Psest_2815	0.57	-3.4
3,003,591	+		Psest_2815	0.57	-0.2
3,003,591	+		Psest_2815	0.57	-0.9
3,003,592	-		Psest_2815	0.57	+0.6
3,003,592	-		Psest_2815	0.57	+0.4
3,003,636	+		Psest_2815	0.62	-0.1
3,003,637	-		Psest_2815	0.62	-0.4
3,003,810	+		Psest_2815	0.82	-2.7
3,003,811	-		Psest_2815	0.83	-0.2
3,003,811	-		Psest_2815	0.83	+0.2
3,003,866	+		Psest_2815	0.89	-1.0
3,003,866	+		Psest_2815	0.89	-2.4
3,003,866	+		Psest_2815	0.89	-1.1
3,003,866	+		Psest_2815	0.89	+0.1
3,003,866	+		Psest_2815	0.89	-1.1
3,003,866	+		Psest_2815	0.89	-0.4
3,004,181	-		Psest_2816	0.12	+1.0
3,004,181	-		Psest_2816	0.12	+1.3
3,004,181	-		Psest_2816	0.12	-0.4
3,004,181	-		Psest_2816	0.12	+0.8
3,004,181	-		Psest_2816	0.12	+1.7
3,004,181	-		Psest_2816	0.12	+1.6
3,004,382	-		Psest_2816	0.30	-0.1
3,004,617	-		Psest_2816	0.51	-0.1
3,004,617	-		Psest_2816	0.51	+0.1
3,004,726	+		Psest_2816	0.61	-1.6
3,004,726	+		Psest_2816	0.61	-0.5
3,004,727	-		Psest_2816	0.61	+0.9
3,004,727	-		Psest_2816	0.61	+1.2
3,004,752	-		Psest_2816	0.63	+0.3
3,004,752	-		Psest_2816	0.63	-0.0
3,004,754	-		Psest_2816	0.63	+0.6
3,004,754	-		Psest_2816	0.63	-0.7
3,004,754	-		Psest_2816	0.63	+0.7
3,004,754	-		Psest_2816	0.63	+0.7
3,004,754	-		Psest_2816	0.63	-0.2
3,004,754	-		Psest_2816	0.63	-0.6
3,004,754	-		Psest_2816	0.63	-0.1
3,004,754	-		Psest_2816	0.63	-0.0
3,004,759	+		Psest_2816	0.64	-0.1
3,004,760	-		Psest_2816	0.64	-0.2
3,004,760	-		Psest_2816	0.64	-0.7
3,004,777	+		Psest_2816	0.65	-3.6
3,004,895	-		Psest_2816	0.76	+0.2