Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2511

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
2,688,599	+		Psest_2510	0.81	-0.3
2,688,599	+		Psest_2510	0.81	-0.5
2,688,599	+		Psest_2510	0.81	-0.6
2,688,599	+		Psest_2510	0.81	-1.5
2,688,599	+		Psest_2510	0.81	-1.0
2,688,600	-		Psest_2510	0.81	+1.4
2,688,600	-		Psest_2510	0.81	+0.1
2,688,600	-		Psest_2510	0.81	-0.0
2,688,600	-		Psest_2510	0.81	+1.3
2,688,608	+		Psest_2510	0.81	-2.6
2,688,608	+		Psest_2510	0.81	-0.8
2,688,609	-		Psest_2510	0.81	-0.5
2,688,609	-		Psest_2510	0.81	+0.2
2,688,609	-		Psest_2510	0.81	-0.4
2,688,609	-		Psest_2510	0.81	-0.5
2,688,609	-		Psest_2510	0.81	+1.1
2,688,743	+		Psest_2510	0.85	-0.9
2,688,743	+		Psest_2510	0.85	+0.0
2,688,743	+		Psest_2510	0.85	-0.5
2,688,743	+		Psest_2510	0.85	-2.2
2,688,744	-		Psest_2510	0.85	-0.2
2,688,744	-		Psest_2510	0.85	+1.7
2,688,744	-		Psest_2510	0.85	+0.7
2,688,744	-		Psest_2510	0.85	+3.4
2,688,744	-		Psest_2510	0.85	+0.6
2,688,843	+		Psest_2510	0.88	-0.9
2,688,843	+		Psest_2510	0.88	-3.2
2,688,844	-		Psest_2510	0.88	+0.6
2,688,844	-		Psest_2510	0.88	+0.3
2,688,917	+				-1.2
2,688,917	+				+0.4
2,688,917	+				-0.2
2,688,918	-				-0.0
2,688,918	-				+0.0
2,688,918	-				-0.5
2,688,918	-				+0.4
2,688,918	-				-1.0
2,688,921	+				+0.0
2,688,921	+				-0.9
2,688,922	-				-0.4
2,688,922	-				-0.3
2,688,922	-				+0.2
2,688,922	-				+0.2
2,688,922	-				-2.0
2,688,922	-				+0.5
2,688,922	-				-2.1
2,688,922	-				-0.3
2,688,977	+				-1.1
2,689,143	+				-0.0
2,689,144	-				-2.0
2,689,375	+				+1.8
2,689,441	+				+0.6
2,689,441	+				-0.7
2,689,441	+				-2.5
2,689,442	-				+0.8
2,689,442	-				+0.2
2,689,442	-				-0.7
2,689,442	-				-0.0
2,689,442	-				-0.3
2,689,442	-				-0.2
2,689,710	-		Psest_2511	0.21	-0.6
2,689,754	-		Psest_2511	0.25	-0.2
2,689,791	+		Psest_2511	0.29	+0.6
2,689,834	+		Psest_2511	0.33	-0.9
2,689,835	-		Psest_2511	0.33	-0.7
2,690,018	+		Psest_2511	0.52	-1.9
2,690,018	+		Psest_2511	0.52	-1.3
2,690,019	-		Psest_2511	0.52	+0.4
2,690,343	+		Psest_2511	0.84	-1.1
2,690,343	+		Psest_2511	0.84	+0.1
2,690,344	-		Psest_2511	0.85	+0.1
2,690,344	-		Psest_2511	0.85	+1.0
2,690,359	+		Psest_2511	0.86	+0.4
2,690,406	+				-1.3
2,690,406	+				-1.2
2,690,406	+				-0.7
2,690,406	+				-0.6
2,690,406	-				+0.4
2,690,407	-				+1.1
2,690,407	-				+0.5
2,690,407	-				+1.9
2,690,410	+				-1.0
2,690,410	+				-0.5
2,690,411	-				-1.6
2,690,411	-				-1.0
2,690,411	-				-1.9
2,690,451	+				+0.8
2,690,451	+				+1.1
2,690,451	+				+1.6
2,690,451	+				-0.3
2,690,451	+				+0.2
2,690,451	+				-0.4
2,690,451	+				-1.4
2,690,452	-				-1.0
2,690,526	+				-0.0
2,690,536	-				-0.6
2,690,536	-				-0.3
2,690,628	-				+0.3
2,690,714	-				-1.0
2,690,715	+				-0.9
2,690,715	+				+2.3
2,690,715	+				-1.3
2,690,715	+				-2.1
2,690,715	+				-0.0
2,690,715	+				-0.8
2,690,715	+				-1.4
2,690,716	-				+0.2
2,690,716	-				-1.5
2,690,716	-				-1.0
2,690,716	-				+0.2
2,690,716	-				+2.0
2,690,716	-				+0.3
2,690,716	-				+0.3
2,690,716	-				-1.0
2,690,716	-				-1.2
2,690,716	-				-0.3
2,690,716	-				-0.7
2,690,716	-				+0.9
2,690,895	+		Psest_2512	0.26	-0.3
2,690,896	-		Psest_2512	0.27	+1.5
2,690,910	+		Psest_2512	0.28	+1.3
2,690,910	+		Psest_2512	0.28	+1.0
2,690,910	+		Psest_2512	0.28	-0.4
2,690,910	+		Psest_2512	0.28	+0.3
2,690,911	-		Psest_2512	0.28	-0.7
2,690,911	-		Psest_2512	0.28	-0.6
2,690,911	-		Psest_2512	0.28	-0.5
2,690,934	+		Psest_2512	0.31	-1.0
2,690,935	-		Psest_2512	0.31	-0.8
2,690,935	-		Psest_2512	0.31	+0.3
2,690,935	-		Psest_2512	0.31	+1.3
2,690,935	-		Psest_2512	0.31	-0.3
2,690,935	-		Psest_2512	0.31	+0.6
2,690,949	+		Psest_2512	0.33	-0.4
2,690,950	-		Psest_2512	0.33	-0.2
2,691,015	+		Psest_2512	0.40	-0.8
2,691,015	+		Psest_2512	0.40	+0.7
2,691,047	-		Psest_2512	0.44	-2.8
2,691,052	+		Psest_2512	0.45	-1.7
2,691,062	-		Psest_2512	0.46	-2.4
2,691,175	-		Psest_2512	0.59	-1.2
2,691,175	-		Psest_2512	0.59	+0.4
2,691,189	+		Psest_2512	0.61	-2.7
2,691,190	-		Psest_2512	0.61	-0.4
2,691,190	-		Psest_2512	0.61	-3.1
2,691,190	-		Psest_2512	0.61	+1.0
2,691,190	-		Psest_2512	0.61	-0.6
2,691,240	+		Psest_2512	0.67	+0.8
2,691,240	+		Psest_2512	0.67	-2.0
2,691,241	-		Psest_2512	0.67	+0.2
2,691,241	-		Psest_2512	0.67	-1.5
2,691,241	-		Psest_2512	0.67	+0.6
2,691,241	-		Psest_2512	0.67	-1.0
2,691,264	-		Psest_2512	0.70	+0.3